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PLM3-1_200_b1_sep16_scaffold_1818

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_1818_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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2..1027
DNA (1026bp) protein (342aa)
Major facilitator superfamily MFS_1 bin=GWB2_Ignavibacteria_35_12 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
major facilitator superfamily protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
PLM3-1_200_b1_sep16_scaffold_1818_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1024..1977)
DNA (954bp) protein (318aa)
Zn-dependent dipeptidase bin=bin1_lowGC species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
Zn-dependent dipeptidase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1818_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(2138..3364)
DNA (1227bp) protein (409aa)
putative dioxygenase bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
dioxygenase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1818_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(3522..5081)
DNA (1560bp) protein (520aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] bin=bin1_lowGC species=Hippea alviniae genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1818_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(5071..6051)
DNA (981bp) protein (327aa)
rfaF; ADP-heptose:LPS heptosyltransferase bin=bin1_lowGC species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
rfaF; ADP-heptose:LPS heptosyltransferase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1818_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6172..7122
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] bin=bin1_lowGC species=Halanaerobium hydrogeniformans genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
NAD-dependent epimerase/dehydratase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1818_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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7352..7534
DNA (183bp) protein (61aa)
hypothetical protein; K09791 hypothetical protein bin=bin1_lowGC species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1818_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(7531..7962)
DNA (432bp) protein (144aa)
sucD; succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] bin=bin1_lowGC species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_1818_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(7911..8243)
DNA (333bp) protein (111aa)
sucD; succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] bin=bin1_lowGC species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
sucD2; succinyl-CoA ligase subunit alpha
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1818_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(8372..9241)
DNA (870bp) protein (290aa)
hypothetical protein bin=bin1_lowGC species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1818_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9256..9528)
DNA (273bp) protein (91aa)
hypothetical protein bin=bin1_lowGC species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
GTP-binding protein
Tax=CSP1_2_Dadabacteria
Displaying 11 items

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