ggKbase home page

PLM3-1_200_b1_sep16_scaffold_2254_2

Organism: PLM6_200_b1_sep16_Dadabacteria_40_8

near complete RP 41 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(364..1062)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 195.0
  • Bit_score: 224
  • Evalue 9.60e-56
50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 170.0
  • Bit_score: 175
  • Evalue 1.40e-41
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 246.0
  • Bit_score: 228
  • Evalue 5.50e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Dadabacteria_53_21 → Dadabacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGCGTCATAAGAGACTTGGACGTAAATTGGGAGTGACCACAAAGCATAGGAGATCTATGCTAAGAAATATGGTCACAGACTTCCTGAGGCATGAAAAGATAAAGACAACGGATACAAGGGCCAAGGAGCTACGTAGGCTTTCTGAAAAGATGATTACTCTAGCAAAGGAAGGCTCTCTTCATTCGAGAAGGAAAGCGGCTGAGATTATAAGGGATAAAACAGTCTTAAAGAAGCTATTTGAAGAGATAGCTCAAAAGTTTAAAGATAGACCCGGTGGATACACAAGGGTTATCAAACTTGGATACAGGAGAGGTGATAATGCCCCTATTTCATTGATTGAACTGGTAGCTGAGGAGTTAAAACCAAAAGCGAAGAAGAGAGCGAAGAAAAAGGAAGATAAACCTAAGGCAGAAAGGACAAAGGTTGTTGCGACTAAGAGTCGGAAGAAGGAAGCAGCAGAGGATCTCGGATTAATAGAAAGAAAGGAAAAGACTGAATCTGAGGGAGGGAGTAGTGACTTCAAAGAAGCTACCGAGGCGGGTCAGGTTATAGAAGGGGTTAAAGTCCAGAGTCCCGAGTCGAAAGAATCAATTGAGACTGAGGCTTCGCAAGCGCAGGAAGCTAGTAAAACAGAGATGAAGATATCTGATGAGCGAGTTAGTGAGAGATCACCAGAAGGAGAAAAAAAGTCTGAGTGA
PROTEIN sequence
Length: 233
MRHKRLGRKLGVTTKHRRSMLRNMVTDFLRHEKIKTTDTRAKELRRLSEKMITLAKEGSLHSRRKAAEIIRDKTVLKKLFEEIAQKFKDRPGGYTRVIKLGYRRGDNAPISLIELVAEELKPKAKKRAKKKEDKPKAERTKVVATKSRKKEAAEDLGLIERKEKTESEGGSSDFKEATEAGQVIEGVKVQSPESKESIETEASQAQEASKTEMKISDERVSERSPEGEKKSE*