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PLM3-1_200_b1_sep16_scaffold_2254

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_2254_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1..255)
DNA (255bp) protein (85aa)
luciferase family protein bin=bin1_lowGC species=Sphingomonas sp. KC8 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
luciferase family protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_2254_2
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(364..1062)
DNA (699bp) protein (233aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
50S ribosomal protein L17
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_2254_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1093..2127)
DNA (1035bp) protein (345aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
DNA-directed RNA polymerase subunit alpha
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_2254_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


comp(2198..2782)
DNA (585bp) protein (195aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
30S ribosomal protein S4
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_2254_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(2880..3263)
DNA (384bp) protein (128aa)
SSU ribosomal protein S11P bin=bin1_lowGC species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin1_lowGC organism_group=Unknown_CP
30S ribosomal protein S11
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_2254_6
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(3283..3663)
DNA (381bp) protein (127aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 bin=bin1_lowGC species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
30S ribosomal protein S13
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_2254_7
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3675..3788)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Arcobacter sp. L RepID=G2HWZ7_9PROT
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter sp. L.;"
PLM3-1_200_b1_sep16_scaffold_2254_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3805..4026)
DNA (222bp) protein (74aa)
infA; translation initiation factor IF-1 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
infA; translation initiation factor IF-1
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_2254_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4036..4803)
DNA (768bp) protein (256aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
methionine aminopeptidase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_2254_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4812..5453)
DNA (642bp) protein (214aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] bin=bin1_lowGC species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
adenylate kinase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_2254_11
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(5490..6809)
DNA (1320bp) protein (440aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY bin=bin1_lowGC species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
preprotein translocase subunit SecY
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_2254_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


comp(6806..7243)
DNA (438bp) protein (146aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 bin=bin1_lowGC species=Thermocrinis albus genus=Thermocrinis taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
rplO; 50S ribosomal protein L15
Tax=CSP1_2_Dadabacteria
Displaying 12 items

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