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PLM3_127_b2_sep16_scaffold_5477

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5477_1
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..773
DNA (771bp) protein (257aa)
5-oxoprolinase (EC:3.5.2.9)
hydantoinase Tax=Actinomycetospora chiangmaiensis RepID=UPI000372155F
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_5477_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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840..1466
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9GTH8_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96949.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM3_127_b2_sep16_scaffold_5477_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(1571..1699)
DNA (129bp) protein (43aa)
Transcriptional regulator, AbrB family bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3_127_b2_sep16_scaffold_5477_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1783..1992)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW99699.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_5477_5
RBG_16_Archaea_50_20_curated, Archaea

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2853..3218
DNA (366bp) protein (122aa)
hypothetical protein Tax=crenarchaeote SCGC AAA261-N13 RepID=UPI00036D1214
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
PLM3_127_b2_sep16_scaffold_5477_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3446..4369)
DNA (924bp) protein (308aa)
gluconolactonase (EC:3.1.1.17)
hypothetical protein, partial Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003806776
Uncharacterized protein {ECO:0000313|EMBL:ETW95542.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_5477_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4436..5581)
DNA (1146bp) protein (382aa)
Carboxymuconolactone decarboxylase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Cation/multidrug efflux pump
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_5477_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(5569..6525)
DNA (957bp) protein (319aa)
Methyltransferase type 11 Tax=Nitrolancetus hollandicus Lb RepID=I4EEL6_9CHLR
Methyltransferase type 11 {ECO:0000313|EMBL:CCF83128.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
type 11 methyltransferase
PLM3_127_b2_sep16_scaffold_5477_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6529..6885)
DNA (357bp) protein (119aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000378B3AE
Uncharacterized protein {ECO:0000313|EMBL:ETX06849.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_5477_10
unknown

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comp(6969..7202)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5477_11
unknown

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7365..8093
DNA (729bp) protein (243aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5477_12
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8071..9366)
DNA (1296bp) protein (432aa)
Beta-lactamase, putative Tax=alpha proteobacterium BAL199 RepID=A8TJZ0_9PROT
Beta-lactamase, putative {ECO:0000313|EMBL:EDP66927.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
beta-lactamase, putative
PLM3_127_b2_sep16_scaffold_5477_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9402..9878)
DNA (477bp) protein (159aa)
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI0003818873
dioxygenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_5477_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10096..10449
DNA (354bp) protein (118aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036D1353
Uncharacterized protein {ECO:0000313|EMBL:ETX06503.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_5477_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10507..11520
DNA (1014bp) protein (338aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGV9_SINAD
Uncharacterized protein {ECO:0000313|EMBL:ETX04784.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
F420-dependent methylene-tetrahydromethanopterin reductase
PLM3_127_b2_sep16_scaffold_5477_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11633..12043
DNA (411bp) protein (137aa)
DNA polymerase, beta domain protein region bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase, beta-like region
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_5477_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12040..12462
DNA (423bp) protein (141aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Protein of unknown function DUF86
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_5477_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12540..12839)
DNA (300bp) protein (100aa)
Ribonuclease VapC Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKX9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_5477_19
unknown

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13188..13346
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5477_20
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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13449..13622
DNA (174bp) protein (58aa)
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Displaying 20 items

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