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PLM3_127_b2_sep16_scaffold_5545

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5545_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2..235)
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_5545_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(236..478)
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_5545_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(536..1318)
-----------------
DNA (783bp)
protein (261aa)
Putative aminopeptidase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative aminopeptidase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_5545_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1426..2244)
-----------------
DNA (819bp)
protein (273aa)
hypothetical protein AATC3_01647 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
s-adenosylmethionine transferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_5545_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2285..2521)
-----------------
DNA (237bp)
protein (79aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_5545_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2528..2758)
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_5545_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2976..3512
-----------------
DNA (537bp)
protein (179aa)
NUDIX hydrolase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NUDIX hydrolase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_5545_8
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(3563..4624)
-----------------
DNA (1062bp)
protein (354aa)
Spermidine/putrescine ABC transporter ATPase subunit Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIN4_ROSCS
spermidine/putrescine ABC transporter ATPase
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_127_b2_sep16_scaffold_5545_9
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists

comp(4638..5639)
-----------------
DNA (1002bp)
protein (334aa)
Extracellular solute-binding protein family 1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W3D0_DESIS
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADU66884.1}; Flags: Precursor;; species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indicum (strain ATCC BAA-1389 / S5).;"
PLM3_127_b2_sep16_scaffold_5545_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5674..7344)
-----------------
DNA (1671bp)
protein (557aa)
ABC transporter permease protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JF0_SYMTH
ABC transporter permease
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM3_127_b2_sep16_scaffold_5545_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(7325..7939)
-----------------
DNA (615bp)
protein (205aa)
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (EC:1.1.1.-) bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_5545_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(8350..9753)
-----------------
DNA (1404bp)
protein (468aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] bin=bin7_NC10_sister species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glutamate--ammonia ligase
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_5545_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

9817..11151
-----------------
DNA (1335bp)
protein (445aa)
Major facilitator superfamily MFS_1 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Major facilitator superfamily MFS_1
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Displaying 13 items

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