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PLM3_127_b2_sep16_scaffold_5621

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5621_1
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..173)
DNA (171bp) protein (57aa)
Uncharacterized protein Tax=Coxiella burnetii (strain RSA 331 / Henzerling II) RepID=A9N8Y1_COXBR
uncharacterized protein
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_43_curated
PLM3_127_b2_sep16_scaffold_5621_2
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1361..3694)
DNA (2334bp) protein (778aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1YF58_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EXI65763.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
PLM3_127_b2_sep16_scaffold_5621_3
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3735..5141
DNA (1407bp) protein (469aa)
RND efflux system, outer membrane lipoprotein, NodT family Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LI94_SYNFM
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABK17146.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM3_127_b2_sep16_scaffold_5621_4
unknown

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5640..5855
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5621_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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6045..7247
DNA (1203bp) protein (401aa)
hypothetical protein Tax=Pseudomonas pyrrocinia RepID=UPI00031AB7CB
amidohydrolase 2
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_5621_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7363..8250
DNA (888bp) protein (296aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_5621_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8260..9033
DNA (774bp) protein (258aa)
luciferase-like monooxygenase bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_5621_8
unknown

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9030..9140
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5621_9
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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comp(9325..10503)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_5621_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(10503..12176)
DNA (1674bp) protein (558aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase bin=GWA2_Methylomirabilis_73_35 species=Megasphaera micronuciformis genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_5621_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(12137..14050)
DNA (1914bp) protein (638aa)
Asparagine synthetase bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_5621_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14204..14977
DNA (774bp) protein (258aa)
Glycosyl transferase family 2 bin=GWA2_Methylomirabilis_73_35 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_5621_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14955..16589)
DNA (1635bp) protein (545aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase bin=GWA2_Methylomirabilis_73_35 species=Megasphaera micronuciformis genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_5621_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(16573..17004)
DNA (432bp) protein (144aa)
asparagine synthetase (EC:6.3.5.4)
Asparagine synthetase bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 14 items

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