ggKbase home page

PLM3_127_b2_sep16_scaffold_13277

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_13277_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..673)
DNA (672bp) protein (224aa)
ABC-type metal ion transporter, periplasmic subunit bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
heavy metal ABC transporter substrate-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_13277_2
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(670..1569)
DNA (900bp) protein (300aa)
ABC transporter Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3882D
ABC-3 protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
PLM3_127_b2_sep16_scaffold_13277_3
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(1581..2495)
DNA (915bp) protein (305aa)
Periplasmic solute binding protein bin=GWC2_Elusimicrobia_64_44 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
periplasmic solute binding protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3_127_b2_sep16_scaffold_13277_4
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

comp(2509..3888)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU2_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
PLM3_127_b2_sep16_scaffold_13277_5
unknown

Not on your lists

comp(3946..4248)
DNA (303bp) protein (101aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_13277_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4300..4782)
DNA (483bp) protein (161aa)
Copper resistance protein CopC Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5C3_NITMU
copper resistance protein CopC
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
PLM3_127_b2_sep16_scaffold_13277_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(4980..5255)
DNA (276bp) protein (92aa)
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_13277_8
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5228..6199)
DNA (972bp) protein (324aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
PLM3_127_b2_sep16_scaffold_13277_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6199..8391)
DNA (2193bp) protein (731aa)
TonB-dependent receptor Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IU63_RHOP2
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABD08247.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_127_b2_sep16_scaffold_13277_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8459..8704)
DNA (246bp) protein (82aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_13277_11
unknown

Not on your lists

comp(8842..9465)
DNA (624bp) protein (208aa)

This feature has no annotations

Displaying 11 items

View Taxonomy