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PLM3_127_b2_sep16_scaffold_2005

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2005_1
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1..141)
DNA (141bp) protein (47aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EMR6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85979.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
IS5 family transposase orfB
PLM3_127_b2_sep16_scaffold_2005_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(138..743)
DNA (606bp) protein (202aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EMR5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85978.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
IS3 family transposase OrfA
PLM3_127_b2_sep16_scaffold_2005_3
unknown

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975..1166
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2005_4
unknown

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1233..1682
DNA (450bp) protein (150aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2005_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1803..2315
DNA (513bp) protein (171aa)
DNA polymerase, beta domain protein region bin=GWC2_Methylomirabilis_70_16 species=Thermoproteus uzoniensis genus=Thermoproteus taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA polymerase beta domain-containing protein region
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2005_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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2398..3270
DNA (873bp) protein (291aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000373EFF4
Uncharacterized protein {ECO:0000313|EMBL:KIJ77619.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SAM-dependent methyltransferase
PLM3_127_b2_sep16_scaffold_2005_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3289..4155
DNA (867bp) protein (289aa)
phosphonate ABC transporter substrate-binding protein; K02044 phosphonate transport system substrate-binding protein bin=bin7_NC10_sister species=Sulfitobacter sp. NAS-14.1 genus=Sulfitobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phosphonate ABC transporter phosphate-binding periplasmic component
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2005_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4182..4928
DNA (747bp) protein (249aa)
phosphonate ABC transporter ATPase; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28] bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phnC; phosphonate ABC transporter ATP-binding protein (EC:3.6.3.28)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2005_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4925..5674
DNA (750bp) protein (250aa)
phosphonate ABC transporter permease; K02042 phosphonate transport system permease protein bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phosphonate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2005_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5812..6447)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Sphingobium ummariense RL-3 RepID=T0KJ01_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETW96303.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
dimethyladenosine transferase
PLM3_127_b2_sep16_scaffold_2005_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7575..9095)
DNA (1521bp) protein (507aa)
Putative acetyl-CoA synthetase Tax=Bordetella bronchiseptica 253 RepID=K4QN74_BORBO
Uncharacterized protein {ECO:0000313|EMBL:ETW98608.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
acetyl-CoA synthetase
PLM3_127_b2_sep16_scaffold_2005_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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9296..10273
DNA (978bp) protein (326aa)
bug43; hypothetical protein bin=bin7_NC10_sister species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
protein bugT
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2005_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10284..10727
DNA (444bp) protein (148aa)
Tripartite tricarboxylate transporter TctB family bin=GWA2_Methylomirabilis_73_35 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2005_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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10729..12255
DNA (1527bp) protein (509aa)
hypothetical protein bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2005_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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12394..14709
DNA (2316bp) protein (772aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2005_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(15081..15500)
DNA (420bp) protein (140aa)
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2005_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15638..16762)
DNA (1125bp) protein (375aa)
Alcohol dehydrogenase, zinc-binding domain protein bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium vanbaalenii genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2005_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(16759..17793)
DNA (1035bp) protein (345aa)
oxidoreductase domain-containing protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
oxidoreductase domain-containing protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_2005_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17845..18504)
DNA (660bp) protein (220aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2005_20
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

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18569..19879
DNA (1311bp) protein (437aa)
General substrate transporter Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QRJ7_PERMH
general substrate transporter
General substrate transporter {ECO:0000313|EMBL:ACO03884.1}; species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 14350 / EX-H1).;"
PLM3_127_b2_sep16_scaffold_2005_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(19901..21883)
DNA (1983bp) protein (661aa)
Dehydrogenase E1 component bin=GWA2_Methylomirabilis_73_35 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase, E1 component
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 21 items

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