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PLM3_127_b2_sep16_scaffold_2056

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2056_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..241
DNA (240bp) protein (80aa)
Endonuclease/exonuclease/phosphatase bin=GWA2_Methylomirabilis_73_35 species=Herbaspirillum frisingense genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2056_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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908..1645
DNA (738bp) protein (246aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ADP-ribose pyrophosphatase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2056_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1747..2478)
DNA (732bp) protein (244aa)
Putative membrane protein bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2056_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2529..3707
DNA (1179bp) protein (393aa)
EmrB/QacA family drug resistance transporter bin=bin7_NC10_sister species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator superfamily transporter
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_2056_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3863..4900
DNA (1038bp) protein (346aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2056_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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4897..5178
DNA (282bp) protein (94aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_2056_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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5200..5427
DNA (228bp) protein (76aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2056_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5685..6392
DNA (708bp) protein (236aa)
hypothetical protein; K07019 bin=bin7_NC10_sister species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2056_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6402..7697
DNA (1296bp) protein (432aa)
Uncharacterized protein Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GHW4_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2056_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7812..9446
DNA (1635bp) protein (545aa)
Thiamine pyrophosphate protein bin=GWC2_Syntrophobacterales_56_13 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
thiamine pyrophosphate protein central region
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2056_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(9641..10597)
DNA (957bp) protein (319aa)
Peptide ABC transporter membrane protein bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2056_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10620..11579)
DNA (960bp) protein (320aa)
Oligopeptide ABC transporter substrate-binding protein Tax=Oceanibaculum indicum P24 RepID=K2JBJ2_9PROT
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2056_13
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11630..13426)
DNA (1797bp) protein (599aa)
Peptide ABC transporter substrate-binding protein bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
extracellular solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_2056_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13508..14152)
DNA (645bp) protein (215aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 14 items

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