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PLM3_127_b2_sep16_scaffold_2061

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2061_1
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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2..151
DNA (150bp) protein (50aa)
hypothetical protein bin=bin3_NC10 species=Endozoicomonas elysicola genus=Endozoicomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Zixibacteria_48_11_curated
PLM3_127_b2_sep16_scaffold_2061_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299..571
DNA (273bp) protein (91aa)
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_2061_3
unknown

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742..858
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2061_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

858..1145
DNA (288bp) protein (96aa)
iscU; iron-sulfur cluster assembly protein IscU; K04488 nitrogen fixation protein NifU and related proteins bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
FeS cluster assembly scaffold IscU
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2061_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1222..1488
DNA (267bp) protein (89aa)
7Fe ferredoxin bin=bin7_NC10_sister species=Microlunatus phosphovorus genus=Microlunatus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
fdxA; ferredoxin
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_2061_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1540..1848
DNA (309bp) protein (103aa)
Ferredoxin bin=GWD2_Deltaproteobacteria_55_8 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Rieske (2Fe-2S) iron-sulfur domain
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_2061_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1895..2302
DNA (408bp) protein (136aa)
thioredoxin-like protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
thioredoxin-like protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_2061_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2304..3563
DNA (1260bp) protein (420aa)
biotin carboxylase-like bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2061_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3608..3781
DNA (174bp) protein (58aa)
glutaredoxin bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2061_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3915..4847
DNA (933bp) protein (311aa)
Putative F420-dependent oxidoreductase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUB3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETW96391.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like protein
PLM3_127_b2_sep16_scaffold_2061_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4960..6003
DNA (1044bp) protein (348aa)
glycoside hydrolase family protein (EC:2.4.1.-)
group 1 glycosyl transferase bin=bin3_NC10 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_2061_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6011..8191
DNA (2181bp) protein (727aa)
putative amylo-alpha-1,6-glucosidase (EC:3.2.1.33) bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
amylo-alpha-1,6-glucosidase
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_2061_13
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8220..9380)
DNA (1161bp) protein (387aa)
Glucosyltransferase Tax=Thermobifida fusca TM51 RepID=R9F5R7_THEFU
glucosyltransferase
Glucosyltransferase {ECO:0000313|EMBL:AAZ56290.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM3_127_b2_sep16_scaffold_2061_14
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

10929..11672
DNA (744bp) protein (248aa)
hypothetical protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
PLM3_127_b2_sep16_scaffold_2061_15
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12108..13388)
DNA (1281bp) protein (427aa)
Uncharacterized protein Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z9E5_CYAAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ55195.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain PCC 10605).;"
PLM3_127_b2_sep16_scaffold_2061_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13785..14159
DNA (375bp) protein (125aa)
Resolvase domain protein bin=GWA2_Elusimicrobia_69_24 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2061_17
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

14113..15009
DNA (897bp) protein (299aa)
Resolvase domain protein bin=GWA2_Elusimicrobia_69_24 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_2061_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15041..15577
DNA (537bp) protein (179aa)
Resolvase domain protein bin=GWA2_Elusimicrobia_69_24 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2061_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

15783..17864
DNA (2082bp) protein (694aa)
Twin-arginine translocation pathway signal Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AR4_MESSB
twin-arginine translocation pathway signal
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_2061_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18176..18685
DNA (510bp) protein (170aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00037A0BDB
transposase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2061_21
unknown

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18946..19692
DNA (747bp) protein (249aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2061_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

19698..20192
DNA (495bp) protein (165aa)
integrase catalytic subunit bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphingobium yanoikuyae genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
integrase catalytic subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_2061_23
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20225..21241
DNA (1017bp) protein (339aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7Y3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETX08529.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase 2
PLM3_127_b2_sep16_scaffold_2061_24
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22698..23906)
DNA (1209bp) protein (403aa)
frc; Formyl-coenzyme A transferase (EC:2.8.3.16)
formyl-CoA transferase Tax=Amycolatopsis benzoatilytica RepID=UPI0003736D51
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_2061_25
unknown

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comp(24245..24493)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2061_26
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

24602..25627
DNA (1026bp) protein (342aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00037A0BDB
integrase catalytic subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_127_b2_sep16_scaffold_2061_27
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(25858..26709)
DNA (852bp) protein (284aa)
adenylyl cyclase bin=bin8_Chloro species=Ornithinimicrobium pekingense genus=Ornithinimicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
family 3 adenylate cyclase
Tax=CSP1_4_Chloroflexi
PLM3_127_b2_sep16_scaffold_2061_28
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26669..27013)
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G2Z0_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK76361.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
Displaying 28 items

View Taxonomy