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PLM3_127_b2_sep16_scaffold_2390

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2390_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3..197
DNA (195bp) protein (65aa)
WD40 domain-containing protein; K03641 TolB protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
biopolymer transport TolB-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2390_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

244..870
DNA (627bp) protein (209aa)
OmpA/MotB domain protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpA/MotB domain protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2390_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

942..1790
DNA (849bp) protein (283aa)
Tol-Pal system YbgF bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_2390_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1807..2100)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2334..2960
DNA (627bp) protein (209aa)
Alpha/beta hydrolase family protein bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2980..3585)
DNA (606bp) protein (202aa)
hypothetical protein bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3597..4337
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4395..5102)
DNA (708bp) protein (236aa)
Beta-lactamase-like bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Beta-lactamase-like
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2390_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5106..6869)
DNA (1764bp) protein (588aa)
hypothetical protein bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6877..8424)
DNA (1548bp) protein (516aa)
Putative ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gliding motility ABC transporter auxillary protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8421..9185)
DNA (765bp) protein (255aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-copper enzyme maturation ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2390_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9182..10162)
DNA (981bp) protein (327aa)
ABC transporter bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2390_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10178..10555)
DNA (378bp) protein (126aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
4-hydroxybenzoyl-CoA thioesterase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10607..11548)
DNA (942bp) protein (314aa)
26S proteasome subunit P45 family (EC:3.6.4.3)
Proteasome-activating nucleotidase bin=GWF2_Methylomirabilis_70_14 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11553..12077)
DNA (525bp) protein (175aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12197..13051
DNA (855bp) protein (285aa)
Thioesterase superfamily protein bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2390_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13048..13950
DNA (903bp) protein (301aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI000360718E
RNA methylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_2390_18

Not on your lists

14237..14527
DNA (291bp) protein (97aa)
id=4374045 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Marine sediment metagenome DNA, contig: S06H3_L06332 {ECO:0000313|EMBL:GAI02244.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 18 items

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