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PLM3_127_b2_sep16_scaffold_2406

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2406_1
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..654)
DNA (654bp) protein (218aa)
Putative gluconate dehydrogenase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67M08_SYMTH
gluconate dehydrogenase
Putative gluconate dehydrogenase {ECO:0000313|EMBL:BAD41288.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM3_127_b2_sep16_scaffold_2406_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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876..1550
DNA (675bp) protein (225aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80)
2-oxopent-4-enoate hydratase Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WQK4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETW92555.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_2406_3
unknown

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1595..1921
DNA (327bp) protein (109aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2406_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1931..2824
DNA (894bp) protein (298aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW99399.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter membrane protein 1, haat family
PLM3_127_b2_sep16_scaffold_2406_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2828..4093)
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IQZ9_RHOP2
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD09361.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_127_b2_sep16_scaffold_2406_6
Mycobacterium bovis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4136..4759)
DNA (624bp) protein (208aa)
Putative O-phosphotransferase Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QKD9_9MYCO
Putative O-phosphotransferase Rv2636/MT2714 (EC 2 .7.1.-) {ECO:0000313|EMBL:CEJ35212.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium bovis.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2406_7
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(5010..5285)
DNA (276bp) protein (92aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen bin=GWA2_Methylomirabilis_73_35 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_2406_8
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(5349..5558)
DNA (210bp) protein (70aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkyl hydroperoxide reductase
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_2406_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5828..6883
DNA (1056bp) protein (352aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000373AEF4
TRAP transporter solute receptor, unknown substrate 7
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_2406_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6994..7569
DNA (576bp) protein (192aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036BC330
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_2406_11
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7586..8905
DNA (1320bp) protein (440aa)
Uncharacterized protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMQ9_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC21532.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
PLM3_127_b2_sep16_scaffold_2406_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(8936..10144)
DNA (1209bp) protein (403aa)
CoA-transferase III family protein bin=GWA2_Methylomirabilis_73_35 species=Kosakonia radicincitans genus=Kosakonia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Formyl-CoA transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2406_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10482..12011
DNA (1530bp) protein (510aa)
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_2406_14
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(12087..12836)
DNA (750bp) protein (250aa)
ABC transporter related Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T7A5_MICAI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWM68405.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
ABC transporter-like protein
Displaying 14 items

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