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PLM3_127_b2_sep16_scaffold_2408

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2408_1
unknown

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comp(1..81)
DNA (81bp) protein (27aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2408_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(88..528)
DNA (441bp) protein (147aa)
Ribonuclease VapC Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01US4_SOLUE
twitching motility protein PilT
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2408_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(525..785)
DNA (261bp) protein (87aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2408_4
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(933..2456)
DNA (1524bp) protein (508aa)
Alpha amylase catalytic region Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFT1_DESAR
alpha amylase
Alpha amylase catalytic region {ECO:0000313|EMBL:AEB10200.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
PLM3_127_b2_sep16_scaffold_2408_5
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2453..5212)
DNA (2760bp) protein (920aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG38_9BACT
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3_127_b2_sep16_scaffold_2408_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5502..6530
DNA (1029bp) protein (343aa)
Putative NAD-dependent alcohol dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2408_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6542..8065
DNA (1524bp) protein (508aa)
menE1; 2-succinylbenzoate--CoA ligase (EC:6.2.1.26)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2408_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8062..8829
DNA (768bp) protein (256aa)
Enoyl-CoA hydratase/isomerase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2408_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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8832..9833
DNA (1002bp) protein (334aa)
luciferase-like protein bin=bin7_NC10_sister species=Sciscionella marina genus=Sciscionella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_2408_10
R_NC10_66_22, NC10, Bacteria

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9933..10232
DNA (300bp) protein (100aa)
prevent-host-death protein bin=bin9_gal15 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
prevent-host-death family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_2408_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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10259..10669
DNA (411bp) protein (137aa)
hypothetical protein bin=bin9_gal15 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_2408_12
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10731..11918
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6G0V4_9DELT
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KIG17551.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
PLM3_127_b2_sep16_scaffold_2408_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(11949..12761)
DNA (813bp) protein (271aa)
AAA ATPase Tax=Chloroflexus RepID=A9WDV6_CHLAA
ATPase AAA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_127_b2_sep16_scaffold_2408_14
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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13813..14130
DNA (318bp) protein (106aa)
Putative uncharacterized protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DDU2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH21655.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
PLM3_127_b2_sep16_scaffold_2408_15
unknown

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comp(14037..14267)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2408_16

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14607..14903
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TJP2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKK77204.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase of ISAar1, IS1595 family, ISSod11 group
Displaying 16 items

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