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PLM3_127_b2_sep16_scaffold_2676

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2676_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..868)
DNA (867bp) protein (289aa)
60 kDa chaperonin bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groEL; chaperonin GroEL
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2676_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(904..1191)
DNA (288bp) protein (96aa)
10 kDa chaperonin bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groS; chaperone Hsp10 (GroES), part of GroE chaperone system
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2676_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1535..1699)
DNA (165bp) protein (55aa)
Putative regulatory protein, FmdB family bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FmdB family regulatory protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2676_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1794..2624)
DNA (831bp) protein (277aa)
Heat shock protein DnaJ domain protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heat shock protein DnaJ domain protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2676_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3002..3931
DNA (930bp) protein (310aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2676_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

4017..5240
DNA (1224bp) protein (408aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034D573C
cytochrome p450
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_127_b2_sep16_scaffold_2676_trna_1
unknown

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5202..5275
DNA (74bp)
transferRNA Arg
PLM3_127_b2_sep16_scaffold_2676_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5674..6261)
DNA (588bp) protein (196aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
conserved protein of unknown function
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2676_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6773..7135
DNA (363bp) protein (121aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2676_9
unknown

Not on your lists

comp(7222..7554)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2676_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7643..8506
DNA (864bp) protein (288aa)
Putative uncharacterized protein bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2676_11
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8569..8862)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8P0A1_9BRAD
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_2676_12
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8917..9591)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Bradyrhizobium sp. S23321 RepID=I0G091_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_127_b2_sep16_scaffold_2676_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9968..10477)
DNA (510bp) protein (170aa)
ABC-type branched-chain amino acid transport system, ATPase component Tax=Variovorax sp. CF313 RepID=J2T6S4_9BURK
ABC transporter
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_2676_14
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10474..10755)
DNA (282bp) protein (94aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) {ECO:0000313|EMBL:CCD95038.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCD95038.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) Tax=Bradyrhizobium sp. ORS 375 RepID=H0SLG1_9BRAD
HAAT family amino acid/amide ABC transporter ATP-binding protein 1
PLM3_127_b2_sep16_scaffold_2676_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10850..11242
DNA (393bp) protein (131aa)
UPF0076 protein bin=bin7_NC10_sister species=Saccharomonospora saliphila genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
endoribonuclease L-PSP
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_2676_16
unknown

Not on your lists

comp(11248..11394)
DNA (147bp) protein (49aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM3_127_b2_sep16_scaffold_2676_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11479..11976
DNA (498bp) protein (166aa)
id=3674960 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2676_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12055..12759
DNA (705bp) protein (235aa)
ABC transport system protein bin=GWC2_Methylomirabilis_70_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid transport system / permease component family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2676_19
unknown

Not on your lists

comp(13087..13395)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2676_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13651..14253
DNA (603bp) protein (201aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2676_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14231..14884
DNA (654bp) protein (218aa)
Methyltransferase type 12 bin=GWA2_Methylomirabilis_73_35 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase family protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2676_22
unknown

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15319..16299
DNA (981bp) protein (327aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2676_trna_3
unknown

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comp(16164..16236)
DNA (73bp)
transferRNA Ala
PLM3_127_b2_sep16_scaffold_2676_23
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16296..17483
DNA (1188bp) protein (396aa)
Penicillin-binding protein, beta-lactamase class C Tax=Herbaspirillum sp. CF444 RepID=J3DJJ3_9BURK
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EJL93269.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
beta-lactamase
PLM3_127_b2_sep16_scaffold_2676_trna_2
unknown

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comp(17503..17586)
DNA (84bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_2676_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17638..18834)
DNA (1197bp) protein (399aa)
Chromate transporter, chromate ion transporter (CHR) family bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
chromate transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2676_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19020..19406
DNA (387bp) protein (129aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ43_PSEUX
alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2676_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19508..21649
DNA (2142bp) protein (714aa)
Indolepyruvate ferredoxin oxidoreductase, alpha subunit bin=GWA2_Methylomirabilis_73_35 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative indolepyruvate oxidoreductase subunit alpha
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2676_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21660..23210
DNA (1551bp) protein (517aa)
2-oxoacid:ferredoxin oxidoreductase, gamma subunit bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative indolepyruvate oxidoreductase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 42 in total

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