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PLM3_127_b2_sep16_scaffold_2682

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2682_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1..966
DNA (966bp) protein (322aa)
hyuB; N-methylhydantoinase B (EC:3.5.2.14)
N-methylhydantoinase B Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z282_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:ETX04099.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_2682_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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933..1343
DNA (411bp) protein (137aa)
hyuB; N-methylhydantoinase B (EC:3.5.2.14)
N-methylhydantoinase B Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z282_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:ETX04099.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_2682_3
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1366..2205
DNA (840bp) protein (280aa)
beta-lactamase precursor protein (EC:3.5.2.6)
beta-lactamase Tax=Herbaspirillum seropedicae RepID=UPI00030DE305
Beta-lactamase class A {ECO:0000313|EMBL:EJL81923.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
PLM3_127_b2_sep16_scaffold_2682_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2215..3018
DNA (804bp) protein (268aa)
Enoyl-CoA hydratase/carnithine racemase Tax=Bradyrhizobium sp. WSM471 RepID=H5Y7B6_9BRAD
enoyl-CoA hydratase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_2682_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3169..3456
DNA (288bp) protein (96aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI0003727203
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_2682_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3453..3869
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Ribonuclease VapC Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213F6_RHOPB
PilT protein-like protein
PLM3_127_b2_sep16_scaffold_2682_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3931..4320
DNA (390bp) protein (130aa)
luciferase-like protein bin=bin1_lowGC species=Halopiger xanaduensis genus=Halopiger taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
F420-dependent methylene-tetrahydromethanopterin reductase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2682_8
R_NC10_66_22, NC10, Bacteria

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comp(4477..5373)
DNA (897bp) protein (299aa)
Putative beta-lactamase bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. S23321 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_2682_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5385..7001)
DNA (1617bp) protein (539aa)
Acetolactate synthase bin=GWB1_Spirochaetes_59_5 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
acetolactate synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2682_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7046..8098
DNA (1053bp) protein (351aa)
2-dehydropantoate 2-reductase bin=GWA2_Methylomirabilis_73_35 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2682_11
GWA2_OD1_47_10, Parcubacteria, Bacteria

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8227..8688
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=Labrenzia alexandrii DFL-11 RepID=B9QWP4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKU52406.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2682_12
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

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8685..9155
DNA (471bp) protein (157aa)
mutator MutT; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
ADP-ribose pyrophosphatase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
PLM3_127_b2_sep16_scaffold_2682_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9499..11157
DNA (1659bp) protein (553aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000367F811
Uncharacterized protein {ECO:0000313|EMBL:ETX06099.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
family 5 extracellular solute-binding protein
PLM3_127_b2_sep16_scaffold_2682_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11197..12306
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003490D85
Uncharacterized protein {ECO:0000313|EMBL:ETX04634.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
TIM-barrel fold metal-dependent hydrolase
PLM3_127_b2_sep16_scaffold_2682_15
unknown

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12547..12837
DNA (291bp) protein (97aa)
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM3_127_b2_sep16_scaffold_2682_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12834..14030
DNA (1197bp) protein (399aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide ABC transporter substrate-binding protein
PLM3_127_b2_sep16_scaffold_2682_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14131..15642
DNA (1512bp) protein (504aa)
AMP-dependent synthetase and ligase Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZY5_ACIFD
Uncharacterized protein {ECO:0000313|EMBL:ETX05878.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
AMP-dependent synthetase and ligase
PLM3_127_b2_sep16_scaffold_2682_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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15792..16334
DNA (543bp) protein (181aa)
Putative sensor histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Crp/Fnr family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2682_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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16397..16693
DNA (297bp) protein (99aa)
id=14625264 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_2682_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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17031..17384
DNA (354bp) protein (118aa)
Oxidoreductase, short-chain dehydrogenase/reductase family bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2682_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(17353..18258)
DNA (906bp) protein (302aa)
Spore coat polysaccharide biosynthesis protein spsK bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
spsK; Spore coat polysaccharide biosynthesis protein spsK
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2682_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(18265..18678)
DNA (414bp) protein (138aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWA2_Methylomirabilis_73_35 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two component, sigma54 specific, transcriptional regulator, Fis family
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2682_23
unknown

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comp(18767..18961)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2682_24
unknown

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comp(18999..19199)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 24 items

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