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PLM3_127_b2_sep16_scaffold_2728

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2728_1
RBG_16_NC10_65_8_curated, NC10, Bacteria

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3..1340
DNA (1338bp) protein (446aa)
Transposase IS4 family protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAJ2_ANAD2
Transposase, IS4 family
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_2728_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1475..2059)
DNA (585bp) protein (195aa)
Non-canonical purine NTP pyrophosphatase bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Ham1-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2728_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2247..2978)
DNA (732bp) protein (244aa)
Ribonuclease PH bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ribonuclease PH
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2728_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2981..4822)
DNA (1842bp) protein (614aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative N-acetylmuramoyl-L-alanine amidase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2728_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4866..5738)
DNA (873bp) protein (291aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2728_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5738..6832)
DNA (1095bp) protein (365aa)
dTDP-glucose 4,6-dehydratase bin=GWA2_OP3_52_12 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
dTDP-glucose 4,6-dehydratase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_2728_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6907..8229
DNA (1323bp) protein (441aa)
Sigma-54 dependent response regulator bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sigma-54 dependent DNA-binding response regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2728_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8308..10554)
DNA (2247bp) protein (749aa)
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2728_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10760..11917)
DNA (1158bp) protein (386aa)
putative HAD superfamily hydrolase bin=bin3_NC10 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10
putative HAD superfamily hydrolase
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_2728_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11874..12578)
DNA (705bp) protein (235aa)
Putative HAD superfamily hydrolase bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium chubuense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HAD-superfamily hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2728_11
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12733..13425)
DNA (693bp) protein (231aa)
Putative lipoprotein Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HS15_9LEPT
Putative lipoprotein {ECO:0000313|EMBL:EQA54821.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9.;"
lipoprotein
PLM3_127_b2_sep16_scaffold_2728_12
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13674..14513)
DNA (840bp) protein (280aa)
Putative secreted protein Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQL2_BORPD
bug51; hypothetical protein
Tax=RBG_13_Deltaproteobacteria_53_10_curated
Displaying 12 items

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