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PLM3_127_b2_sep16_scaffold_2734

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2734_1
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..1125
DNA (1125bp) protein (375aa)
4-hydroxyphenylacetate 3-hydroxylase Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ML0_CUPPJ
4-hydroxyphenylacetate 3-hydroxylase
4-hydroxyphenylacetate-3-hydroxylase {ECO:0000313|EMBL:CEG31104.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
PLM3_127_b2_sep16_scaffold_2734_2
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

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1572..1793
DNA (222bp) protein (74aa)
Toxin-antitoxin system, antitoxin component, HicB family Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L0K8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP87906.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2734_3
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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comp(2055..3152)
DNA (1098bp) protein (366aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Coccomyxa subellipsoidea genus=Coccomyxa taxon_order=unknown taxon_class=Trebouxiophyceae phylum=Chlorophyta tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
oxidoreductase domain-containing protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_2734_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3158..3817)
DNA (660bp) protein (220aa)
Thiol-disulfide oxidoreductase resA bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
resA; thiol-disulfide oxidoreductase ResA
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2734_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3977..4684)
DNA (708bp) protein (236aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2734_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4688..5440)
DNA (753bp) protein (251aa)
Spermidine/putrescine import ATP-binding protein potA bin=GWA2_Methylomirabilis_73_35 species=Actinoplanes sp. genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2734_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5525..6469)
DNA (945bp) protein (315aa)
Inner-membrane translocator bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2734_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(6462..7340)
DNA (879bp) protein (293aa)
Inner-membrane translocator bin=GWC2_Methylomirabilis_70_16 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2734_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(7347..8567)
DNA (1221bp) protein (407aa)
Extracellular ligand-binding receptor bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
extracellular ligand-binding receptor
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2734_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8564..9241)
DNA (678bp) protein (226aa)
id=2724780 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2734_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9238..9789)
DNA (552bp) protein (184aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2734_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9786..10313)
DNA (528bp) protein (176aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2734_13
unknown

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10651..11052
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2734_14

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11167..11436
DNA (270bp) protein (90aa)
Transposase, Rhodopirellula-type (Fragment) Tax=mine drainage metagenome RepID=T1B720_9ZZZZ
Transposase, Rhodopirellula-type {ECO:0000313|EMBL:EQD68756.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase
PLM3_127_b2_sep16_scaffold_2734_15
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11452..11724
DNA (273bp) protein (91aa)
Rubredoxin reductase, selenocysteine-containing bin=GWD2_Desulfuromonadales_54_10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rubredoxin reductase, selenocysteine-containing
Tax=GWC2_Geobacteraceae_53_11_curated
PLM3_127_b2_sep16_scaffold_2734_16
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11721..11909
DNA (189bp) protein (63aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Geobacter metallireducens RCH3 RepID=H1L7N5_GEOME
rubredoxin reductase, selenocysteine-containing
Tax=GWC2_Geobacteraceae_55_20_curated
Displaying 16 items

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