ggKbase home page

PLM3_127_b2_sep16_scaffold_2970

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2970_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..2024)
DNA (2022bp) protein (674aa)
Putative molybdopterin oxidoreductase bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin oxidoreductase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2970_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(2265..2666)
DNA (402bp) protein (134aa)
Probable ribonuclease VapC bin=GWF2_Lentisphaerae_50_93 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PilT domain-containing protein
Tax=CG_Arma_01
PLM3_127_b2_sep16_scaffold_2970_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2663..2896)
DNA (234bp) protein (78aa)
Prevent-host-death protein bin=GWF2_Lentisphaerae_50_93 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
prevent-host-death protein
Tax=GWF2_Lentisphaerae_50_93_curated
PLM3_127_b2_sep16_scaffold_2970_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3192..4421
DNA (1230bp) protein (410aa)
atzC; N-isopropylammelide isopropylaminohydrolase (EC:3.5.99.4)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Enterococcus faecalis genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2970_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4721..5287
DNA (567bp) protein (189aa)
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_2970_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5288..6226
DNA (939bp) protein (313aa)
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2970_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6243..7517
DNA (1275bp) protein (425aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2970_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7514..8662
DNA (1149bp) protein (383aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5)
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2970_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8702..8968
DNA (267bp) protein (89aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2970_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9134..11410
DNA (2277bp) protein (759aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 10 items

View Taxonomy