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PLM3_127_b2_sep16_scaffold_11679

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_11679_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1..1995
DNA (1995bp) protein (665aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
hypothetical protein Tax=Streptomyces sp. CNS335 RepID=UPI00035DBB73
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_127_b2_sep16_scaffold_11679_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2132..2299
DNA (168bp) protein (56aa)
prevent-host-death family protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_11679_3
unknown

Not on your lists

comp(2280..2594)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_11679_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2646..2954)
DNA (309bp) protein (103aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_11679_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2914..3099)
DNA (186bp) protein (62aa)
hypothetical protein bin=bin3_NC10 species=Methylosinus sp. LW4 genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_11679_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3161..3508)
DNA (348bp) protein (116aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_11679_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3508..4173)
DNA (666bp) protein (222aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_11679_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4257..4805)
DNA (549bp) protein (183aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00037C16AC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
PLM3_127_b2_sep16_scaffold_11679_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5005..5553)
DNA (549bp) protein (183aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_11679_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5829..6824)
DNA (996bp) protein (332aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_11679_11
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7018..7485)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Brevibacillus brevis RepID=UPI000374F652
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMT53039.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
PLM3_127_b2_sep16_scaffold_11679_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7619..8614)
DNA (996bp) protein (332aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_11679_13
unknown

Not on your lists

9106..9303
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_11679_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9428..10150)
DNA (723bp) protein (241aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00030BB825
phosphoglycerate mutase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_11679_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10134..11117)
DNA (984bp) protein (328aa)
Putative 2-hydroxyacid dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_11679_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11249..13195
DNA (1947bp) protein (649aa)
Protein bugT-like protein bin=GWA2_Methylomirabilis_73_35 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
bug43; hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_11679_17
RLO_PLX_64_10, Bacteria

Not on your lists

13232..14368
DNA (1137bp) protein (379aa)
Threonine synthase Tax=Desulfovibrio desulfuricans ND132 RepID=F0JBU4_DESDE
threonine synthase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_11679_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14483..14971
DNA (489bp) protein (163aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_11679_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..17139
DNA (2100bp) protein (700aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036E3381
Uncharacterized protein {ECO:0000313|EMBL:ETX02452.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
5-oxoprolinase ATP-hydrolyzing
PLM3_127_b2_sep16_scaffold_11679_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17136..18929
DNA (1794bp) protein (598aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037399BB
Uncharacterized protein {ECO:0000313|EMBL:ETX07239.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
5-oxoprolinase
PLM3_127_b2_sep16_scaffold_11679_21
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

18988..20595
DNA (1608bp) protein (536aa)
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=RBG_16_Acidobacteria_64_8_curated
PLM3_127_b2_sep16_scaffold_11679_22
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20625..21668
DNA (1044bp) protein (348aa)
Extracellular solute-binding protein Tax=Thauera sp. 63 RepID=N6X6Y7_9RHOO
putative TRAP dicarboxylate transporter, subunit DctP
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_11679_23
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21858..22187
DNA (330bp) protein (110aa)
Putative TRAP dicarboxylate transporter, subunit DctP Tax=Variovorax paradoxus B4 RepID=T1XMC3_VARPD
putative TRAP dicarboxylate transporter, subunit DctP
Tax=RBG_16_Betaproteobacteria_66_20_curated
Displaying 23 items

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