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PLM3_127_b2_sep16_scaffold_3043

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3043_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..823)
DNA (822bp) protein (274aa)
ABC superfamily ATP binding cassette transporter, membrane protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_3043_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(820..1722)
DNA (903bp) protein (301aa)
Putative ABC spermidine/putrescine transporter permease protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC spermidine/putrescine transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_3043_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1726..2211)
DNA (486bp) protein (162aa)
DinB family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZZ0_CALAS
DinB family protein
DinB family protein {ECO:0000313|EMBL:AHG89092.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_3043_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2282..2665)
DNA (384bp) protein (128aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Pil-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_3043_5
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2662..2907)
DNA (246bp) protein (82aa)
Transcriptional regulator, AbrB family bin=GWF2_Methylomirabilis_70_14 species=Crocosphaera watsonii genus=Crocosphaera taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AbrB family transcriptional regulator
Tax=CG_Delta_02
PLM3_127_b2_sep16_scaffold_3043_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2986..4386)
DNA (1401bp) protein (467aa)
Amidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C792_SPHTD
amidase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_3043_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4383..4589)
DNA (207bp) protein (69aa)
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_3043_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4731..6020
DNA (1290bp) protein (430aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B58630
mdtG; putative drug efflux system
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_127_b2_sep16_scaffold_3043_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6040..6567
DNA (528bp) protein (176aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_3043_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6688..7446
DNA (759bp) protein (253aa)
Rhomboid family protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAN7_ANADF
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ABS25783.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_3043_11
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

7472..7969
DNA (498bp) protein (166aa)
DNA polymerase, beta domain protein region Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S014_THEPD
DNA polymerase subunit beta
Tax=CG_Arma_01
PLM3_127_b2_sep16_scaffold_3043_12
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

7966..8388
DNA (423bp) protein (141aa)
HEPN domain protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S256_FERPA
HEPN domain protein
Tax=CG_Arma_01
PLM3_127_b2_sep16_scaffold_3043_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8449..9609
DNA (1161bp) protein (387aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase protein Tax=Salinisphaera shabanensis E1L3A RepID=U2FTE3_9GAMM
methionine synthase II (cobalamin-independent)-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_3043_14
unknown

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9814..9972
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3043_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10083..11162)
DNA (1080bp) protein (360aa)
malate/L-lactate dehydrogenase (EC:1.1.1.-)
Malate/L-lactate dehydrogenase Tax=Achromobacter arsenitoxydans SY8 RepID=H0FEA8_9BURK
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_3043_16
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11401..12183
DNA (783bp) protein (261aa)
hypothetical protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003615AC1
Uncharacterized protein {ECO:0000313|EMBL:EJZ29158.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3043_17
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12274..12750
DNA (477bp) protein (159aa)
Putative uncharacterized protein bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM3_127_b2_sep16_scaffold_3043_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12887..13945)
DNA (1059bp) protein (353aa)
hyuB; N-methylhydantoinase B (EC:3.5.2.14)
N-methylhydantoinase B Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z282_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:ETW97770.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Displaying 18 items

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