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PLM3_127_b2_sep16_scaffold_3607

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3607_1
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1190)
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI0003653FA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU93258.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM3_127_b2_sep16_scaffold_3607_2
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(1192..1611)
DNA (420bp) protein (140aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI0003783E06
Uncharacterized protein {ECO:0000313|EMBL:EMY78960.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii serovar Ranarum str. ICFT.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3607_trna_1
unknown

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1756..1840
DNA (85bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_3607_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1856..3139
DNA (1284bp) protein (428aa)
trigger factor; K03545 trigger factor bin=bin7_NC10_sister species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
trigger factor
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_3607_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3214..3858
DNA (645bp) protein (215aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_3607_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3881..5128
DNA (1248bp) protein (416aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_3607_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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5195..5902
DNA (708bp) protein (236aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
uroporphyrin-III C/tetrapyrrole methyltransferase
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_3607_7
unknown

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comp(5991..6476)
DNA (486bp) protein (162aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3607_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6614..7402
DNA (789bp) protein (263aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
thiD; phosphomethylpyrimidine kinase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_3607_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7411..8262
DNA (852bp) protein (284aa)
Putative Sec-independent protein translocase protein TatC bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Sec-independent protein translocase protein TatC
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_3607_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8262..9911
DNA (1650bp) protein (550aa)
DEAD/DEAH box helicase domain protein bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhlB; ATP-dependent RNA helicase RhlB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_3607_11
unknown

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9942..10073
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3607_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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10046..10210
DNA (165bp) protein (55aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI0003604212
Uncharacterized protein {ECO:0000313|EMBL:ETX07127.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
methionine synthase
Displaying 13 items

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