name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_3944_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
1..717
|
RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=GWA2_Rokubacteria_73_35_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
comp(997..1170)
|
DinB family protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(1496..1711)
|
biotin/lipoyl attachment domain-containing protein bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
biotin/lipoyl attachment domain-containing protein
Tax=CSP1_6_Rokubacteria
|
|
PLM3_127_b2_sep16_scaffold_3944_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(1704..3050)
|
Carbamoyl-phosphate synthase L chain ATP-binding protein bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Carbamoyl-phosphate synthase L chain ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(3093..4055)
|
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(4055..4810)
|
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(4898..6055)
|
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(6290..6955)
|
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(6948..7328)
|
FeS cluster assembly scaffold protein NifU bin=GWC2_Methylomirabilis_70_24 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
FeS assembly protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(7325..8479)
|
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
8521..8844
|
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
8864..9226
|
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_13
unknown
|
Not on your lists |
9226..9447
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_3944_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(9452..9652)
|
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FeS assembly protein IscX
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9669..9854)
|
Ferredoxin, 2Fe-2S type, ISC system bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferredoxin
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9854..11686)
|
Chaperone protein HscA (Hsc66) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hscA; chaperone protein HscA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(11664..12254)
|
Co-chaperone protein HscB (Hsc20) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hscB; co-chaperone protein HscB
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(12332..12661)
|
Iron-sulfur cluster assembly protein IscA bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iron-sulfur cluster assembly accessory protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(12689..13108)
|
iscU; iron-sulfur cluster assembly protein IscU; K04488 nitrogen fixation protein NifU and related proteins bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
iscU; iron-sulfur cluster assembly protein IscU
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(13123..14349)
|
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(14340..14798)
|
Putative Transcription factor IscR bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transcription factor IscR
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
14937..16148
|
gdh; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(16139..17143)
|
galactose-1-phosphate uridyl transferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(17155..18507)
|
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
peptidase S1 and S6 chymotrypsin/Hap
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(18512..20674)
|
chloride channel bin=bin7_NC10_sister species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
chloride channel
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(20674..21546)
|
Conserved putative chloride channel bin=GWC2_Methylomirabilis_70_16 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_27
unknown
|
Not on your lists |
22553..22798
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_3944_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(22804..23694)
|
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(23697..24986)
|
id=3735764 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_3944_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(24998..26011)
|
MoxR-like ATPases (EC:3.6.3.-) bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
MoxR-like ATPases (EC:3.6.3.-)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|