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PLM3_127_b2_sep16_scaffold_6581

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6581_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..885
DNA (885bp) protein (295aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_6581_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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896..1894
DNA (999bp) protein (333aa)
Polyprenyl synthetase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ispB; octaprenyl diphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6581_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1903..2703
DNA (801bp) protein (267aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6581_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2666..3127)
DNA (462bp) protein (154aa)
Regulatory protein, FmdB family bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type I antifreeze protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_6581_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3159..3836
DNA (678bp) protein (226aa)
Tetratricopeptide TPR_4 bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_6581_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3990..5720
DNA (1731bp) protein (577aa)
id=2937131 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6581_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5795..7159
DNA (1365bp) protein (455aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6581_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7159..7593
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6581_9
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7630..8913
DNA (1284bp) protein (428aa)
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CEL14642.1}; EC=6.1.1.21 {ECO:0000313|EMBL:CEL14642.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hisS1; Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JNY8_SACES
PLM3_127_b2_sep16_scaffold_6581_10
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8922..10718
DNA (1797bp) protein (599aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspartyl-tRNA synthetase Tax=Elioraea tepidiphila RepID=UPI00037C9DA7
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3_127_b2_sep16_scaffold_6581_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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10836..11714
DNA (879bp) protein (293aa)
PhoH-like protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PhoH-related ATPase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_6581_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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11714..12178
DNA (465bp) protein (155aa)
Probable rRNA maturation factor bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytidine deaminase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_6581_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12184..13074
DNA (891bp) protein (297aa)
GTPase Era bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
era; GTPase Era
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_6581_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13076..13852
DNA (777bp) protein (259aa)
DNA repair protein RecO bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA repair protein recO (Recombination protein O)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6581_15
R_NC10_66_22, NC10, Bacteria

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13849..14166
DNA (318bp) protein (106aa)
Glycine--tRNA ligase alpha subunit Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=SYGA_DESAA
glyQ; glycyl-tRNA synthetase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 15 items

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