ggKbase home page

PLM3_127_b2_sep16_scaffold_4414

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4414_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..1046)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WIX9_GEOS8
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_4414_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1043..1735)
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein Tax=Geobacter sulfurreducens RepID=D7AL93_GEOSK
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_4414_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1790..2317)
DNA (528bp) protein (176aa)
id=4852964 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4414_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2354..2608)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4414_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2590..3294)
DNA (705bp) protein (235aa)
3-Methyladenine DNA glycosylase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L03_SYMTH
3-methyladenine DNA glycosylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_127_b2_sep16_scaffold_4414_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3376..3759
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4414_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3729..5000)
DNA (1272bp) protein (424aa)
pobA; iron-sulfur protein (EC:1.14.12.-)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003775FFC
Uncharacterized protein {ECO:0000313|EMBL:ETX06272.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_4414_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5012..6031)
DNA (1020bp) protein (340aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative TIM-barrel fold metal-dependent hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4414_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6066..7145)
DNA (1080bp) protein (360aa)
Uncharacterized protein Tax=Afipia felis ATCC 53690 RepID=K8NKM6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29666.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
NMT1/THI5 like domain-containing protein
PLM3_127_b2_sep16_scaffold_4414_10
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(7179..8000)
DNA (822bp) protein (274aa)
ABC transporter permease Tax=Herbaspirillum lusitanum RepID=UPI0002FAE631
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_4414_11
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7988..8764)
DNA (777bp) protein (259aa)
taurine-transporting AtPase (EC:3.6.3.36)
Taurine-transporting ATPase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUP0_PSEUX
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDQ71215.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
PLM3_127_b2_sep16_scaffold_4414_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8837..9064)
DNA (228bp) protein (76aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
N-acyl-D-amino-acid deacylase Tax=halophilic archaeon DL31 RepID=G2MN09_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ETW92760.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_4414_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9410..10441
DNA (1032bp) protein (344aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01195.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
N-acyl-D-amino-acid deacylase bin=GWC2_Methylomirabilis_70_24 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
N-acyl-D-aspartate/D-glutamate deacylase
PLM3_127_b2_sep16_scaffold_4414_14
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

10476..12605
DNA (2130bp) protein (710aa)
Putative uncharacterized protein Tax=Vitis vinifera RepID=F6GV28_VITVI
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4414_15
unknown

Not on your lists

12710..13378
DNA (669bp) protein (223aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4414_16
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13756..15120)
DNA (1365bp) protein (455aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Bacillus clausii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
anion transporter
Tax=GWC2_Syntrophus_56_31_curated
PLM3_127_b2_sep16_scaffold_4414_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15215..15946)
DNA (732bp) protein (244aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 17 items

View Taxonomy