ggKbase home page

PLM3_127_b2_sep16_scaffold_4536

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4536_1

Not on your lists

comp(2..316)
DNA (315bp) protein (105aa)
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM3_127_b2_sep16_scaffold_4536_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(374..1126)
DNA (753bp) protein (251aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036BF22D
Uncharacterized protein {ECO:0000313|EMBL:ETW92585.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
short-chain dehydrogenase/reductase SDR
PLM3_127_b2_sep16_scaffold_4536_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1313..1912
DNA (600bp) protein (200aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029X4_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82152.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_127_b2_sep16_scaffold_4536_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1921..2289)
DNA (369bp) protein (123aa)
Predicted thioesterase Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L3E6_KORCO
Uncharacterized protein {ECO:0000313|EMBL:ETW98574.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
thioesterase
PLM3_127_b2_sep16_scaffold_4536_5
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2321..3082)
DNA (762bp) protein (254aa)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase Tax=Pseudomonas sp. GM80 RepID=J2XDG2_9PSED
Aldolase {ECO:0000313|EMBL:KJK05884.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5.;"
Class II Aldolase/Adducin Family Protein
PLM3_127_b2_sep16_scaffold_4536_6
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3170..4072)
DNA (903bp) protein (301aa)
Epoxide hydrolase {ECO:0000313|EMBL:ETY83948.2}; EC=3.3.2.9 {ECO:0000313|EMBL:ETY83948.2};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
Alpha/beta hydrolase fold protein Tax=Burkholderia terrae BS001 RepID=I5CCA8_9BURK
alpha/beta hydrolase fold protein
PLM3_127_b2_sep16_scaffold_4536_7
unknown

Not on your lists

comp(4200..4334)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4536_8
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4491..6290
DNA (1800bp) protein (600aa)
Asparagine synthetase Tax=Thiorhodococcus drewsii AZ1 RepID=G2DWV9_9GAMM
Asparagine synthetase {ECO:0000313|EMBL:EXJ13476.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
asparagine synthase
PLM3_127_b2_sep16_scaffold_4536_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6408..7517)
DNA (1110bp) protein (370aa)
group 1 glycosyl transferase bin=bin7_NC10_sister species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4536_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7568..8710
DNA (1143bp) protein (381aa)
Glycine/d-amino acid oxidase, deaminating Tax=Halosarcina pallida JCM 14848 RepID=M0DAE0_9EURY
Glycine/d-amino acid oxidase, deaminating {ECO:0000313|EMBL:ELZ31129.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
glycine/d-amino acid oxidase, deaminating
PLM3_127_b2_sep16_scaffold_4536_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8724..8912)
DNA (189bp) protein (63aa)
Luciferase family protein bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 11 items

View Taxonomy