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PLM3_127_b2_sep16_scaffold_4626

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4626_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3..503
DNA (501bp) protein (167aa)
Putative membrane protein bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4626_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

691..1602
DNA (912bp) protein (304aa)
Dehydrogenase with different specificities bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4626_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1580..3532)
DNA (1953bp) protein (651aa)
id=14625885 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4626_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3703..4326
DNA (624bp) protein (208aa)
thrC; threonine synthase (TS) (EC:4.2.3.1) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
thrC; threonine synthase (TS) (EC:4.2.3.1)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_4626_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4343..4906
DNA (564bp) protein (188aa)
thrC; threonine synthase (TS) (EC:4.2.3.1) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
thrC; threonine synthase (TS) (EC:4.2.3.1)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_4626_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4906..5184
DNA (279bp) protein (93aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
molybdopterin synthase subunit MoaD
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_4626_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5253..6536
DNA (1284bp) protein (428aa)
hydroxypyruvate reductase (EC:1.1.1.81)
Glycerate 2-kinase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4626_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6720..7757
DNA (1038bp) protein (346aa)
Probable dual-specificity RNA methyltransferase RlmN bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium 98 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
radical SAM enzyme, Cfr family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4626_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7757..9064
DNA (1308bp) protein (436aa)
tRNA (2-methylthio-N6-threonylcarbamyl-A37) methylthiotransferase bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA 2-methylthioadenosine synthase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4626_10
unknown

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comp(9237..9449)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4626_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9747..10100
DNA (354bp) protein (118aa)
S-methyl-5'-thioadenosine phosphorylase bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylthioadenosine phosphorylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4626_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10093..11040
DNA (948bp) protein (316aa)
PfkB bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenosine kinase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4626_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11125..11598
DNA (474bp) protein (158aa)
[2Fe-2S] binding domain protein bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
[2Fe-2S] binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4626_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11608..14007
DNA (2400bp) protein (800aa)
Carbon-monoxide dehydrogenase (Acceptor) bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4626_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14017..14886
DNA (870bp) protein (290aa)
Molybdopterin dehydrogenase FAD-binding protein bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin dehydrogenase FAD-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4626_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14947..15516
DNA (570bp) protein (190aa)
Molybdenum cofactor cytidylyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MobA-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4626_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15528..16418
DNA (891bp) protein (297aa)
ATPase associated with various cellular activities AAA_5 bin=GWA2_Methylomirabilis_73_35 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase AAA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4626_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16418..17563
DNA (1146bp) protein (382aa)
VWA domain containing CoxE-like protein bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
VWA containing CoxE family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_4626_19
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17713..18447
DNA (735bp) protein (245aa)
transposase IS4 family protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=CSP1_8_Deltaproteobacteria
Displaying 19 items

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