ggKbase home page

PLM3_127_b2_sep16_scaffold_4900

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4900_1
unknown

Not on your lists

279..368
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4900_2

Not on your lists

comp(558..1811)
DNA (1254bp) protein (418aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E336_GEOLS
Uncharacterized protein {ECO:0000313|EMBL:KKL72647.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase IS204/IS1001/IS1096/IS1165 family protein
PLM3_127_b2_sep16_scaffold_4900_3
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

2356..2847
DNA (492bp) protein (164aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00037A0BDB
transposase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_127_b2_sep16_scaffold_4900_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2851..3156
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Burkholderia sp. BT03 RepID=J2INY6_9BURK
transposase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4900_5
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

3711..4745
DNA (1035bp) protein (345aa)
Sulfonate/nitrate/taurine ABC transporter substrate-binding protein Tax=Archaea RepID=E6N845_9ARCH
sulfonate/nitrate/taurine ABC transporter substrate-binding protein
Sulfonate/nitrate/taurine ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAJ48464.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
PLM3_127_b2_sep16_scaffold_4900_6
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

4771..5547
DNA (777bp) protein (259aa)
Putative ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3P2_CALAS
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL99879.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_4900_7
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

5563..6321
DNA (759bp) protein (253aa)
ABC transporter permease; K02050 NitT/TauT family transport system permease protein bin=bin9_gal15 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
ABC transporter permease
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_127_b2_sep16_scaffold_4900_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6462..7652
DNA (1191bp) protein (397aa)
Predicted membrane protein Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SN04_HAHCH bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protein of unknown function DUF989
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_4900_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8625..9149
DNA (525bp) protein (175aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_4900_10
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9714..10193
DNA (480bp) protein (160aa)
Luciferase family protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY7_ROSCS
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABU56374.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3_127_b2_sep16_scaffold_4900_11
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10315..11175)
DNA (861bp) protein (287aa)
Putative acyltransferase Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9R0G7_NOSS7
putative acyltransferase
Putative acyltransferase {ECO:0000313|EMBL:AFY50871.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
PLM3_127_b2_sep16_scaffold_4900_12
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11238..12284
DNA (1047bp) protein (349aa)
NAD-dependent epimerase/dehydratase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPL7_ROSS1
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABQ88570.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3_127_b2_sep16_scaffold_4900_13
unknown

Not on your lists

12281..12409
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 13 items

View Taxonomy