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PLM3_127_b2_sep16_scaffold_1032

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1032_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..709)
DNA (708bp) protein (236aa)
id=4547909 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_1032_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

823..1905
DNA (1083bp) protein (361aa)
Alcohol dehydrogenase class III Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4XG90_PSEDE
alcohol dehydrogenase class III
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_127_b2_sep16_scaffold_1032_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

2048..3235
DNA (1188bp) protein (396aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
filamentation induced by cAMP protein fic
Tax=RBG_16_Nitrospirae_64_22_curated
PLM3_127_b2_sep16_scaffold_1032_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3383..3928
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BJ32_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_1032_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4145..4396
DNA (252bp) protein (84aa)
id=3500019 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1032_6
RLO_PLX_64_10, Bacteria

Not on your lists

comp(4518..7886)
DNA (3369bp) protein (1123aa)
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_1032_7
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8111..8272)
DNA (162bp) protein (54aa)
Putative uncharacterized protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=GWC2_Deltaproteobacteria_42_11_curated
PLM3_127_b2_sep16_scaffold_1032_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8286..9689)
DNA (1404bp) protein (468aa)
Uncharacterized protein Tax=Bradyrhizobium sp. WSM1253 RepID=I2QIJ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETW99606.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1032_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9706..10905)
DNA (1200bp) protein (400aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX07255.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
PLM3_127_b2_sep16_scaffold_1032_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10961..12166)
DNA (1206bp) protein (402aa)
Amidohydrolase 2 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1032_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12264..13208)
DNA (945bp) protein (315aa)
Luciferase-like, subgroup Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZU3_9CHLR
Luciferase-like, subgroup {ECO:0000313|EMBL:EFH82083.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
luciferase-like monooxygenase
PLM3_127_b2_sep16_scaffold_1032_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13409..13879
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Afipia RepID=D6V0R5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETX06946.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
D-proline reductase
PLM3_127_b2_sep16_scaffold_1032_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13904..14602
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G6G1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ETX06947.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1032_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14633..15067
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1032_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15133..15747)
DNA (615bp) protein (205aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_1032_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15819..16226
DNA (408bp) protein (136aa)
Ppox class probable f420-dependent enzyme, family bin=GWC2_Methylomirabilis_70_16 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1032_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16277..16810)
DNA (534bp) protein (178aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_1032_18
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(17051..17281)
DNA (231bp) protein (77aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_13_Planctomycetes_60_9_curated
PLM3_127_b2_sep16_scaffold_1032_19
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17475..19424
DNA (1950bp) protein (650aa)
Amine oxidase Tax=Gloeocapsa sp. PCC 7428 RepID=K9X806_9CHRO
Copper amine oxidase domain-containing protein
Amine oxidase {ECO:0000256|RuleBase:RU000672}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PLM3_127_b2_sep16_scaffold_1032_20
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19479..21710)
DNA (2232bp) protein (744aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ADU51591.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ADU51591.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGD9_THEM7
PLM3_127_b2_sep16_scaffold_1032_21
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

21919..22824
DNA (906bp) protein (302aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037F4586
binding-protein-dependent transport system inner membrane protein
Tax=Caldatribacterium californiense
PLM3_127_b2_sep16_scaffold_1032_22

Not on your lists

22821..23669
DNA (849bp) protein (283aa)
Binding-protein-dependent transport systems inner membrane component Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNU7_MESCW
Marine sediment metagenome DNA, contig: S01H4_C02701 {ECO:0000313|EMBL:GAG66460.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
binding-protein-dependent transport systems inner membrane component
PLM3_127_b2_sep16_scaffold_1032_23
bacterium UASB270, Bacteria

Not on your lists

23688..25151
DNA (1464bp) protein (488aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003619F84
Putative ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:GAK57380.1}; species="Bacteria.;" source="bacterium UASB270.;"
putative ABC-type sugar transport system, periplasmic component
PLM3_127_b2_sep16_scaffold_1032_24
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25153..25608)
DNA (456bp) protein (152aa)
Putative uncharacterized protein Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QJ97_GLUHA
Uncharacterized protein {ECO:0000313|EMBL:KGM44045.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
uncharacterized protein
PLM3_127_b2_sep16_scaffold_1032_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(25701..26105)
DNA (405bp) protein (135aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_24 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amidohydrolase family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_1032_26
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(26116..26520)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F8V8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KGM44045.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
putative uncharacterized protein
PLM3_127_b2_sep16_scaffold_1032_27
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(26726..27724)
DNA (999bp) protein (333aa)
add; adenosine deaminase (Adenosine aminohydrolase) (EC:3.5.4.4)
Adenine deaminase bin=GWA2_Elusimicrobia_69_24 species=Massilia timonae genus=Massilia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_1032_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27880..29769
DNA (1890bp) protein (630aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XUN9_SORCE
hypothetical protein
PLM3_127_b2_sep16_scaffold_1032_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

29824..30267
DNA (444bp) protein (148aa)
putative translation initiation inhibitor, yjgF family bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1032_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(30331..30822)
DNA (492bp) protein (164aa)
Heat shock protein Hsp20 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HSP20 family protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying items 1-30 of 42 in total

View Taxonomy