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PLM3_127_b2_sep16_scaffold_1080

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1080_1
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..103
DNA (102bp) protein (34aa)
Cyclase SCIF309c Tax=Streptomyces zinciresistens K42 RepID=G2GEJ6_9ACTO
Cyclase SCIF309c {ECO:0000313|EMBL:EGX58064.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1080_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(139..1218)
DNA (1080bp) protein (360aa)
Alcohol dehydrogenase (EC:1.1.1.1)
alcohol dehydrogenase Tax=Cupriavidus sp. WS RepID=UPI0003670248
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_127_b2_sep16_scaffold_1080_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1302..2462
DNA (1161bp) protein (387aa)
AMP-dependent synthetase/ligase (EC:6.2.1.26)
AMP-dependent synthetase and ligase Tax=Burkholderia sp. (strain 383) RepID=Q39MZ8_BURS3
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1080_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2550..2936
DNA (387bp) protein (129aa)
AMP-dependent synthetase/ligase (EC:6.2.1.26)
AMP-dependent synthetase and ligase Tax=Burkholderia sp. (strain 383) RepID=Q39MZ8_BURS3
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1080_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2933..4534
DNA (1602bp) protein (534aa)
amine oxidase Tax=Gemmata obscuriglobus RepID=UPI00016C3B20
amine oxidase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABC83069.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM3_127_b2_sep16_scaffold_1080_6
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(4569..6839)
DNA (2271bp) protein (757aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_1080_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6913..7998)
DNA (1086bp) protein (362aa)
Malate/L-lactate dehydrogenase Tax=Frankia sp. EUN1f RepID=D3CYF7_9ACTO
Bll6274 protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1080_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7995..8873)
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GQD0_CUPNN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_1080_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9042..9638
DNA (597bp) protein (199aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_1080_10
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

9706..10596
DNA (891bp) protein (297aa)
F420-dependent dehydrogenase bin=GWA2_Elusimicrobia_69_24 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
F420-dependent dehydrogenase
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_1080_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10682..11032)
DNA (351bp) protein (117aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM3_127_b2_sep16_scaffold_1080_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11244..11489)
DNA (246bp) protein (82aa)
id=3938572 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1080_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11661..12146
DNA (486bp) protein (162aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_1080_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

12166..14841
DNA (2676bp) protein (892aa)
UPF0182 protein DAMO_1249 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEY0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_1080_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14849..15937)
DNA (1089bp) protein (363aa)
hypothetical protein Tax=Rhodococcus opacus RepID=UPI00029CBC11
Uncharacterized protein {ECO:0000313|EMBL:ETX06622.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Mandelate racemase
PLM3_127_b2_sep16_scaffold_1080_16
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16020..17726
DNA (1707bp) protein (569aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z1C8_9ACTN
PLM3_127_b2_sep16_scaffold_1080_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17737..18690
DNA (954bp) protein (318aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036719CE
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1080_18
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18716..19813
DNA (1098bp) protein (366aa)
alpha/beta hydrolase Tax=Ponticaulis koreensis RepID=UPI0003B5FEC9
alpha/beta hydrolase domain-containing protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_1080_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19810..20739)
DNA (930bp) protein (310aa)
Fumarylacetoacetate (FAA) hydrolase family protein bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fumarylacetoacetate (FAA) hydrolase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1080_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20885..22090
DNA (1206bp) protein (402aa)
hypothetical protein Tax=Paenibacillus fonticola RepID=UPI0003605031
Uncharacterized protein {ECO:0000313|EMBL:ETW98122.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
formyl-CoA transferase
PLM3_127_b2_sep16_scaffold_1080_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22111..22878
DNA (768bp) protein (256aa)
3-oxoacyl-(Acyl-carrier protein) reductase Tax=Mesorhizobium sp. STM 4661 RepID=M5F4I8_9RHIZ
3-oxoacyl-ACP synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1080_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22970..24178
DNA (1209bp) protein (403aa)
Major facilitator superfamily MFS_1 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily MFS_1
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1080_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24264..25106)
DNA (843bp) protein (281aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1080_24
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

25212..26573
DNA (1362bp) protein (454aa)
Circularly permuted ATPgrasp domain protein Tax=Leptospira sp. B5-022 RepID=M6D5P3_9LEPT
Circularly permuted ATPgrasp domain protein {ECO:0000313|EMBL:EMJ97951.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. B5-022.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1080_25
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26574..27530
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3R8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL98833.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1080_26
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27535..28500
DNA (966bp) protein (322aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00030B0D48
transglutaminase domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
PLM3_127_b2_sep16_scaffold_1080_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

28740..29642
DNA (903bp) protein (301aa)
HNH endonuclease bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HNH endonuclease
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 27 items

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