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PLM3_127_b2_sep16_scaffold_1280

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1280_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1203
DNA (1203bp) protein (401aa)
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI00035FA261
Uncharacterized protein {ECO:0000313|EMBL:ETX08374.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative hydrolase
PLM3_127_b2_sep16_scaffold_1280_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1286..2248)
DNA (963bp) protein (321aa)
Alcohol dehydrogenase, zinc-binding protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128V6_POLSJ
zinc-binding alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1280_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2602..2877
DNA (276bp) protein (92aa)
Acyl-CoA dehydrogenase type 2 domain protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LL83_HALO1
acyl-CoA dehydrogenase type 2 domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:ETX01660.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_1280_4
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2897..4588
DNA (1692bp) protein (564aa)
Homodimeric dihydroxyacetone kinase {ECO:0000313|EMBL:ABE33434.1}; EC=2.7.1.29 {ECO:0000313|EMBL:ABE33434.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Homodimeric dihydroxyacetone kinase Tax=Burkholderia xenovorans (strain LB400) RepID=Q13R55_BURXL
dihydroxyacetone kinase
PLM3_127_b2_sep16_scaffold_1280_5

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comp(4914..6452)
DNA (1539bp) protein (513aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003634B47
Uncharacterized protein {ECO:0000313|EMBL:KKM90318.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
PLM3_127_b2_sep16_scaffold_1280_6
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6821..7288
DNA (468bp) protein (156aa)
Genome sequencing data, contig C265 Tax=Microcystis aeruginosa PCC 9807 RepID=I4HD73_MICAE
Genome sequencing data, contig C265 {ECO:0000313|EMBL:CCI19997.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9807.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1280_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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7310..8134
DNA (825bp) protein (275aa)
Papain family cysteine protease bin=GWB1_Spirochaetes_59_5 species=Pythium ultimum genus=Pythium taxon_order=Pythiales taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
peptidase C1A papain
Tax=GWB1_Spirochaetes_59_5_curated
PLM3_127_b2_sep16_scaffold_1280_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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8155..8439
DNA (285bp) protein (95aa)
id=4084137 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
PLM3_127_b2_sep16_scaffold_1280_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8485..9657)
DNA (1173bp) protein (391aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037C3DD7
Uncharacterized protein {ECO:0000313|EMBL:ETW98502.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
mandelate racemase/muconate lactonizing protein
PLM3_127_b2_sep16_scaffold_1280_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(9762..10163)
DNA (402bp) protein (134aa)
PIN domain-containing protein bin=GWA2_Methylomirabilis_73_35 species=Thiorhodovibrio sp. 970 genus=Thiorhodovibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1280_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(10249..10485)
DNA (237bp) protein (79aa)
Prevent-host-death protein bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
prevent-host-death family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1280_12
unknown

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10613..10804
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1280_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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10801..12144
DNA (1344bp) protein (448aa)
Amidase bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Amidase
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_1280_14
unknown

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comp(12248..12511)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1280_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12574..14244)
DNA (1671bp) protein (557aa)
sulfoacetaldehyde acetyltransferase (EC:2.2.1.6)
Putative Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain protein Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCG8_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_1280_16
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14670..15242)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6G874_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM77915.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1280_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15276..16199)
DNA (924bp) protein (308aa)
ABC-type transporter, permease component: PepT family bin=GWF2_Methylomirabilis_70_14 species=Alcanivorax dieselolei genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1280_18
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16174..17124)
DNA (951bp) protein (317aa)
ABC transporter permease bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b2_sep16_scaffold_1280_19
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(17137..18882)
DNA (1746bp) protein (582aa)
Hemin-binding lipoprotein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
family 5 extracellular solute-binding protein
Tax=RBG_13_Chloroflexi_54_9_curated
PLM3_127_b2_sep16_scaffold_1280_20
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(19559..20794)
DNA (1236bp) protein (412aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_1280_21

Not on your lists

comp(20936..21361)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4EYA2_MODMB
Uncharacterized protein {ECO:0000313|EMBL:AIF17555.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_78_A04.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1280_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(21530..21676)
DNA (147bp) protein (49aa)
ABC transporter related bin=GWC2_Methylomirabilis_70_24 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livF; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 22 items

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