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PLM3_127_b2_sep16_scaffold_1288

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1288_1
unknown

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comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1288_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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361..1542
DNA (1182bp) protein (394aa)
Putative uncharacterized protein Tax=Sphingobium sp. SYK-6 RepID=G2IKZ3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETW92817.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1288_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1647..2129
DNA (483bp) protein (161aa)
Putative 2,3-dihydroxybiphenyl 1,2-dioxygenase protein Tax=uncultured bacterium CSL144 RepID=G4WVR1_9BACT
glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1288_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4799..5206)
DNA (408bp) protein (136aa)
Rhodanese-related sulfurtransferase bin=GWA2_Methylomirabilis_73_35 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhodanese-related sulfurtransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1288_5
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5325..6053)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Cyanothece RepID=B7K0L1_CYAP8
protein involved in ubiquinone biosynthesis
Uncharacterized protein {ECO:0000313|EMBL:ACK64165.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
PLM3_127_b2_sep16_scaffold_1288_6
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6134..6613)
DNA (480bp) protein (160aa)
Terephthalate 1,2-dioxygenase beta subunit Tax=Burkholderia sp. RPE64 RepID=R4X4C2_9BURK
terephthalate 1,2-dioxygenase beta subunit
Terephthalate 1,2-dioxygenase beta subunit {ECO:0000313|EMBL:BAN28116.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
PLM3_127_b2_sep16_scaffold_1288_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6624..7862)
DNA (1239bp) protein (413aa)
Candidate terephthalate 1,2-dioxygenase oxygenase component large subunit Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y681_RAMTT
Terephthalate 1,2-dioxygenase {ECO:0000313|EMBL:KGH28013.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
terephthalate 1,2-dioxygenase oxygenase component large subunit
PLM3_127_b2_sep16_scaffold_1288_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7943..8734)
DNA (792bp) protein (264aa)
Silent information regulator protein Sir2 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SIR2 family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1288_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8786..9607
DNA (822bp) protein (274aa)
Putative thiosulfate sulfurtransferase Tax=alpha proteobacterium BAL199 RepID=A8TSR0_9PROT
rhodanese
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_1288_10
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9615..11825
DNA (2211bp) protein (737aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM38220.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
Molybdopterin oxidoreductase bin=GWC2_Syntrophobacterales_56_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE
PLM3_127_b2_sep16_scaffold_1288_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11950..12882
DNA (933bp) protein (311aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003770DDF
cyclase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1288_12
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12882..14417
DNA (1536bp) protein (512aa)
Putative uncharacterized protein Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J3E7_PSEUL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK76592.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
PLM3_127_b2_sep16_scaffold_1288_13
unknown

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14427..14732
DNA (306bp) protein (102aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1288_14
unknown

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comp(14876..15406)
DNA (531bp) protein (177aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1288_15
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15421..18546)
DNA (3126bp) protein (1042aa)
Uncharacterized protein Tax=Thauera sp. 63 RepID=N6YDN5_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO80472.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
right handed beta helix region family protein
PLM3_127_b2_sep16_scaffold_1288_16
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18560..20812)
DNA (2253bp) protein (751aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI00036B2BB4
Uncharacterized protein {ECO:0000313|EMBL:EAQ36156.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1288_17
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20809..23547)
DNA (2739bp) protein (913aa)
Uncharacterized protein {ECO:0000313|EMBL:KFG69587.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Putative uncharacterized protein bin=GWE1_Burkholderiales_65_30 species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
PLM3_127_b2_sep16_scaffold_1288_18
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23619..26144)
DNA (2526bp) protein (842aa)
Uncharacterized protein Tax=Leptolyngbya sp. PCC 7375 RepID=K9ETG8_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKV00415.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1288_19
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26141..26506)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YW46_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL78122.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
PLM3_127_b2_sep16_scaffold_1288_20
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(26511..26834)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Calothrix sp. PCC 7507 RepID=K9PME5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY34126.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
PLM3_127_b2_sep16_scaffold_1288_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26846..27358)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Alicycliphilus denitrificans RepID=E8U1I4_ALIDB
hypothetical protein
Baseplate assembly protein V {ECO:0000313|EMBL:GAO26884.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
PLM3_127_b2_sep16_scaffold_1288_22
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27355..28398)
DNA (1044bp) protein (348aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI0003473F30
Uncharacterized protein {ECO:0000313|EMBL:EEG08454.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1288_23
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28391..28753)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3BD89_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD64728.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1288_24
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(28750..29406)
DNA (657bp) protein (219aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI000349E687
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY34122.1}; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
PLM3_127_b2_sep16_scaffold_1288_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(29420..30916)
DNA (1497bp) protein (499aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXC4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84857.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
Displaying 25 items

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