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PLM3_127_b2_sep16_scaffold_1485

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1485_1
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1256)
DNA (1254bp) protein (418aa)
methylhydantoinase Tax=Amycolatopsis methanolica RepID=UPI00036169FC
N-methylhydantoinase A (ATP-hydrolyzing)
N-methylhydantoinase A (ATP-hydrolyzing) {ECO:0000313|EMBL:AIJ22284.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3_127_b2_sep16_scaffold_1485_2
bacterium UASB270, Bacteria

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1471..2415
DNA (945bp) protein (315aa)
Ribose-phosphate pyrophosphokinase Tax=Holophaga foetida DSM 6591 RepID=H1P2G3_9BACT
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:GAK57338.1}; species="Bacteria.;" source="bacterium UASB270.;"
ribose-phosphate pyrophosphokinase
PLM3_127_b2_sep16_scaffold_1485_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2544..2768
DNA (225bp) protein (75aa)
transporter Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4486A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1485_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2800..3831
DNA (1032bp) protein (344aa)
putative NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
Putative NAD-dependent alcohol dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8PGU4_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_1485_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3853..4908
DNA (1056bp) protein (352aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW32_PSEUX
extradiol ring-cleavage dioxygenase class III protein subunit B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_1485_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4969..5217)
DNA (249bp) protein (83aa)
id=1954697 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_1485_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5346..5810)
DNA (465bp) protein (155aa)
Hypothetical conserved protein bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Peptidase aspartic
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1485_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5896..6777)
DNA (882bp) protein (294aa)
ABC transporter permease Tax=Curvibacter lanceolatus RepID=UPI000368EE25
ABC transporter integral membrane subunit {ECO:0000313|EMBL:EHJ95076.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
inner-membrane translocator
PLM3_127_b2_sep16_scaffold_1485_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6774..7634)
DNA (861bp) protein (287aa)
Hydrophobic amino acid ABC transporter permease Tax=Nitratireductor indicus C115 RepID=K2N9J1_9RHIZ
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KFC63461.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative amino acid ABC transporter LivHM family permease protein
PLM3_127_b2_sep16_scaffold_1485_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7648..8868)
DNA (1221bp) protein (407aa)
Extracellular ligand-binding receptor Tax=Nitratireductor indicus C115 RepID=K2P264_9RHIZ
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EKF44194.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ABC transporter substrate-binding protein
PLM3_127_b2_sep16_scaffold_1485_11
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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comp(8870..9577)
DNA (708bp) protein (236aa)
ABC transporter related protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6F4_SPHTD
ABC transporter
Tax=RBG_13_Chloroflexi_50_10_curated
PLM3_127_b2_sep16_scaffold_1485_12
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9574..10059)
DNA (486bp) protein (162aa)
Putative leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC transporter. [livG] (EC:3.6.3.-)
Putative leucine/isoleucine/valine transporter subunit ATP-binding component of ABC transporter. [livG] {ECO:0000313|EMBL:CCQ73840.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCQ73840.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00035FB176
PLM3_127_b2_sep16_scaffold_1485_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10288..11157)
DNA (870bp) protein (290aa)
Putative enoyl-CoA hydratase Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV88_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETX05786.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Enoyl-CoA hydratase echA8
PLM3_127_b2_sep16_scaffold_1485_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11240..13354)
DNA (2115bp) protein (705aa)
CoA-binding domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C154_SPHTD
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:ACZ37971.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_1485_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13475..13741)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX09212.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_1485_16
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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14765..15505
DNA (741bp) protein (247aa)
Methyltransferase family protein bin=GWB2_Chloroflexi_54_36 species=Frankia sp. QA3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Methyltransferase domain {ECO:0000313|EMBL:KJE23114.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
type 11 methyltransferase
PLM3_127_b2_sep16_scaffold_1485_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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15516..16190
DNA (675bp) protein (225aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR84_KORVE bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:ETW93703.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1485_18
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16387..16800
DNA (414bp) protein (138aa)
Microcystis aeruginosa PCC 7806 genome sequencing data, contig C321 Tax=Microcystis aeruginosa RepID=A8YJP3_MICAE
Uncharacterized protein {ECO:0000313|EMBL:ELS47031.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa DIANCHI905.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1485_19
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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16806..17261
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Microcystis aeruginosa RepID=I4HRP2_MICAE
TIR protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAG01953.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa (strain NIES-843).;"
PLM3_127_b2_sep16_scaffold_1485_20
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(17470..18573)
DNA (1104bp) protein (368aa)
Putative Fe-S oxidoreductase Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GD53_9CYAN
Fe-S oxidoreductase
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_1485_21
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18574..18906)
DNA (333bp) protein (111aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI0003671226
4-carboxymuconolactone decarboxylase
PLM3_127_b2_sep16_scaffold_1485_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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19142..19528
DNA (387bp) protein (129aa)
hypothetical protein bin=bin7_NC10_sister species=Sporolactobacillus laevolacticus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_1485_23
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19705..20760)
DNA (1056bp) protein (352aa)
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase (EC:1.5.99.11)
Coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P920_9ARCH
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b2_sep16_scaffold_1485_24
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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20834..21781
DNA (948bp) protein (316aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C870_SPHTD
binding-protein-dependent transport systems inner membrane component
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_127_b2_sep16_scaffold_1485_25
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

21813..22703
DNA (891bp) protein (297aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C869_SPHTD
binding-protein-dependent transport systems inner membrane component
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_127_b2_sep16_scaffold_1485_26
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

22738..24306
DNA (1569bp) protein (523aa)
Extracellular solute-binding protein family 5 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C871_SPHTD
extracellular solute-binding protein family 5
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_127_b2_sep16_scaffold_1485_27
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24429..25349
DNA (921bp) protein (307aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00031E8EDD
Uncharacterized protein {ECO:0000313|EMBL:ETX07424.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_1485_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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25396..26331
DNA (936bp) protein (312aa)
Alcohol dehydrogenase, zinc-binding domain protein bin=GWA2_Methylomirabilis_73_35 species=Calothrix sp. PCC 7507 genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_1485_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(26435..27370)
DNA (936bp) protein (312aa)
ABC-type transporter, permease component: PepT family bin=GWF2_Methylomirabilis_70_14 species=Alcanivorax dieselolei genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dppC; PepT family ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1485_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27375..28316)
DNA (942bp) protein (314aa)
ABC transporter permease bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dppB3; PepT family ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
Displaying items 1-30 of 34 in total

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