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PLM3_127_b2_sep16_scaffold_1702

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1702_1
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..223
DNA (222bp) protein (74aa)
Tyrosine recombinase XerD Tax=Virgibacillus sp. CM-4 RepID=T0JH03_9BACI
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. Vm-5.;"
phage integrase
PLM3_127_b2_sep16_scaffold_1702_2
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

771..1112
DNA (342bp) protein (114aa)
Transcriptional regulator, ArsR family Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VG11_CAUST
ArsR family transcriptional regulator {ECO:0000313|EMBL:AKF83894.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
ArsR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_1702_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1109..1564
DNA (456bp) protein (152aa)
Activator of Hsp90 ATPase 1 family protein Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW34_PARL1
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABS64117.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3_127_b2_sep16_scaffold_1702_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1561..2043
DNA (483bp) protein (161aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAW2_ANADF
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABS25858.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_1702_5
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2086..2814)
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP82948.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
PLM3_127_b2_sep16_scaffold_1702_6
unknown

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2837..3289
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1702_7
unknown

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comp(3412..4560)
DNA (1149bp) protein (383aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1702_8
unknown

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comp(4557..4781)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1702_9
unknown

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comp(4781..5686)
DNA (906bp) protein (302aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1702_10
unknown

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comp(5728..6045)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1702_11
unknown

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comp(6156..7013)
DNA (858bp) protein (286aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1702_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7387..7605
DNA (219bp) protein (73aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1702_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7622..8122
DNA (501bp) protein (167aa)
Transcriptional regulator, Crp/Fnr family bin=GWF2_Methylomirabilis_70_14 species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Crp/Fnr family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_1702_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8139..9368
DNA (1230bp) protein (410aa)
cyclic nucleotide-binding protein bin=bin7_NC10_sister species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1702_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9303..10646)
DNA (1344bp) protein (448aa)
id=14625477 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1702_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10676..12085
DNA (1410bp) protein (470aa)
Amidase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1702_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12159..12815
DNA (657bp) protein (219aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1702_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13076..14092
DNA (1017bp) protein (339aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
aroG-2; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1702_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14810..15235
DNA (426bp) protein (142aa)
TonB family protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1702_trna_1
unknown

Not on your lists

15311..15382
DNA (72bp)
transferRNA Val
PLM3_127_b2_sep16_scaffold_1702_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15448..17241
DNA (1794bp) protein (598aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1702_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17397..17861
DNA (465bp) protein (155aa)
Translation initiation factor IF-3 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation factor IF-3
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_1702_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


17890..18087
DNA (198bp) protein (66aa)
50S ribosomal protein L35 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Megamonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L35
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1702_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


18152..18511
DNA (360bp) protein (120aa)
50S ribosomal protein L20 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L20
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_1702_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


18517..19539
DNA (1023bp) protein (341aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] bin=bin7_NC10_sister species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
pheS; phenylalanyl-tRNA synthetase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1702_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19536..22157
DNA (2622bp) protein (874aa)
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] bin=bin7_NC10_sister species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pheT; phenylalanyl-tRNA ligase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1702_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

22305..22637
DNA (333bp) protein (111aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_1702_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23023..24528
DNA (1506bp) protein (502aa)
Ribonuclease Y bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ribonuclease
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1702_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24544..25308
DNA (765bp) protein (255aa)
Metallophosphoesterase bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metallophosphoesterase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1702_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

25305..26657
DNA (1353bp) protein (451aa)
exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
exodeoxyribonuclease VII large subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying items 1-30 of 40 in total

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