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PLM3_127_b2_sep16_scaffold_1773

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1773_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..431
DNA (429bp) protein (143aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1773_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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435..1142
DNA (708bp) protein (236aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1773_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1453..2931
DNA (1479bp) protein (493aa)
Sensor protein (EC:2.7.13.3)
Putative Sensor protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1773_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3091..3378
DNA (288bp) protein (96aa)
Antibiotic biosynthesis monooxygenase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
antibiotic biosynthesis monooxygenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1773_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3380..4243
DNA (864bp) protein (288aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin dehydrogenase FAD-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_1773_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4240..7128
DNA (2889bp) protein (963aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1773_7
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(7273..7977)
DNA (705bp) protein (235aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein bin=GWC2_Syntrophus__56_31 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_1773_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7977..9857)
DNA (1881bp) protein (627aa)
branched-chain amino acid ABC transporter ATPase Tax=Bradyrhizobium elkanii RepID=UPI00036592BC
branched-chain amino acid ABC transporter ATPase
Uncharacterized protein {ECO:0000313|EMBL:BAL05534.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_127_b2_sep16_scaffold_1773_9
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(9854..10753)
DNA (900bp) protein (300aa)
Permease component of ABC transporter protein bin=GWC2_Syntrophus__56_31 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
branched-chain amino acid transport permease
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_1773_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(10797..12056)
DNA (1260bp) protein (420aa)
Branched-chain amino acid transport system substrate-binding protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HKW9_9BRAD
extracellular ligand-binding receptor
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_1773_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(12231..13397)
DNA (1167bp) protein (389aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1773_12
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(13705..14484)
DNA (780bp) protein (260aa)
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_127_b2_sep16_scaffold_1773_13
unknown

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comp(14435..14707)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1773_14
unknown

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15089..15529
DNA (441bp) protein (147aa)

This feature has no annotations

Displaying 14 items

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