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PLM3_127_b2_sep16_scaffold_1844

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1844_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3..503
DNA (501bp) protein (167aa)
Putative lipoprotein bin=GWF2_Methylomirabilis_70_14 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1844_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(687..1049)
DNA (363bp) protein (121aa)
pgl_[H]; 6-phosphogluconolactonase, eukaryotic type (EC:3.1.1.31)
6-phosphogluconolactonase (6PGL) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1403..2851)
DNA (1449bp) protein (483aa)
carbohydrate kinase; K00851 gluconokinase [EC:2.7.1.12] bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
carbohydrate kinase FGGY
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1844_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2924..3211
DNA (288bp) protein (96aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1844_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3260..3457
DNA (198bp) protein (66aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1844_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3454..4509
DNA (1056bp) protein (352aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Natrialba asiatica genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4615..5517
DNA (903bp) protein (301aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Rhipicephalus pulchellus genus=Rhipicephalus taxon_order=Ixodida taxon_class=Arachnida phylum=Arthropoda tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1844_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5732..6046
DNA (315bp) protein (105aa)
GYD domain superfamily bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
GYD domain superfamily
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6049..6546
DNA (498bp) protein (166aa)
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase bin=bin7_NC10_sister species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
(Fe-S)-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1844_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6546..7868
DNA (1323bp) protein (441aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase bin=bin7_NC10_sister species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1844_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

7865..9841
DNA (1977bp) protein (659aa)
aldehyde:ferredoxin oxidoreductase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_1844_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9937..10821
DNA (885bp) protein (295aa)
2-hydroxy-3-oxopropionate reductase bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-hydroxy-3-oxopropionate reductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1844_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10878..11852
DNA (975bp) protein (325aa)
putative acetyltransferase bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1844_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11843..12211
DNA (369bp) protein (123aa)
Putative Copper resistance protein, copC family bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein CopC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12395..13150
DNA (756bp) protein (252aa)
Lactoylglutathione lyase and related lyases bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lactoylglutathione lyase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1844_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13372..15099)
DNA (1728bp) protein (576aa)
malate synthase A (EC:2.3.3.9)
putative malate synthase bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_1844_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15374..15676
DNA (303bp) protein (101aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15686..16978)
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1844_19
unknown

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comp(17129..17302)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1844_20
unknown

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comp(17390..17557)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1844_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17854..18999
DNA (1146bp) protein (382aa)
Putative molybdopterin oxidoreductase bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin oxidoreductase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1844_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19143..21908)
DNA (2766bp) protein (922aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Protein export membrane protein, SecD/SecF family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21920..22993)
DNA (1074bp) protein (358aa)
Myo-inositol-1-phosphate synthase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Myo-inositol-1-phosphate synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23129..24181)
DNA (1053bp) protein (351aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_1844_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24305..25042)
DNA (738bp) protein (246aa)
Putative ABC transporter (ATP-binding protein) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(25053..25850)
DNA (798bp) protein (266aa)
yrbE; toluene ABC transporter subunit membrane protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
toluene tolerance protein Ttg2B
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_1844_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25847..27748)
DNA (1902bp) protein (634aa)
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27789..28535
DNA (747bp) protein (249aa)
Membrane protein-like protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1844_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

28532..29551
DNA (1020bp) protein (340aa)
Fe-S protein, radical SAM family bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Radical SAM superfamily enzyme
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1844_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

29596..29958
DNA (363bp) protein (121aa)
Radical SAM domain protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 40 in total

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