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PLM3_127_b2_sep16_scaffold_8663

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8663_1
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

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comp(3..449)
DNA (447bp) protein (149aa)
Alcohol dehydrogenase, zinc-binding domain protein bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
zinc-binding alcohol dehydrogenase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
PLM3_127_b2_sep16_scaffold_8663_2
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(553..1350)
DNA (798bp) protein (266aa)
Amidase {ECO:0000313|EMBL:CBN54627.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CBN54627.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
amidase (EC:3.5.1.4)
Amidase Tax=Oscillatoria RepID=D8FW87_9CYAN
PLM3_127_b2_sep16_scaffold_8663_3
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1798..1995)
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VIB5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ07232.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
PLM3_127_b2_sep16_scaffold_8663_4
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1992..2618)
DNA (627bp) protein (209aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI00036D6850
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIF38596.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
dppF; dipeptide ABC transporter ATP-binding protein
PLM3_127_b2_sep16_scaffold_8663_5
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3042..4058)
DNA (1017bp) protein (339aa)
Putative dipeptide ABC transporter, ATP-binding protein Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YW70_BRASO
Oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:KIL97149.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
ddpD; dipeptide ABC transporter ATP-binding protein
PLM3_127_b2_sep16_scaffold_8663_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4064..4909)
DNA (846bp) protein (282aa)
Putative dipeptide ABC transporter Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKH4_9BRAD
Putative dipeptide ABC transporter {ECO:0000313|EMBL:EGP08343.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
dipeptide/oligopeptide/nickel ABC transporter permease
PLM3_127_b2_sep16_scaffold_8663_7
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4906..5931)
DNA (1026bp) protein (342aa)
Binding-protein-dependent transport systems inner membrane component Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKC6_RHOPX
binding-protein-dependent transporter inner membrane component
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_8663_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5936..6811)
DNA (876bp) protein (292aa)
Putative dipeptide/oligopeptide/nickel ABC transporter substrate-binding protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZK85_9BRAD
twin-arginine translocation pathway signal
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_8663_9
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6808..7530)
DNA (723bp) protein (241aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI0002DDD0DE
peptide transporter substrate-binding protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_8663_10
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7657..8787)
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Streptomyces sp. HPH0547 RepID=S3BC34_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD91817.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
amidase
PLM3_127_b2_sep16_scaffold_8663_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8729..9412)
DNA (684bp) protein (228aa)
amidase Tax=Nevskia ramosa RepID=UPI0003B3DC1E
amidase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_8663_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9649..9987
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II bin=GWA2_Methylomirabilis_73_35 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrogen regulatory protein P-II
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_8663_13
unknown

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10014..10235
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 13 items

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