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PLM3_127_b2_sep16_scaffold_29536

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_29536_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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35..613
-----------------
DNA (579bp)
protein (193aa)
oligopeptide transporter bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide transporter
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_29536_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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568..930
-----------------
DNA (363bp)
protein (121aa)
oligopeptide transporter bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
OPT family oligopeptide transporter
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_29536_3
unknown

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1170..1688
-----------------
DNA (519bp)
protein (173aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_29536_4
unknown

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comp(1681..2118)
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_29536_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2355..3299
-----------------
DNA (945bp)
protein (315aa)
Acid phosphatase (Class A) Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZA5_9BRAD
Acid phosphatase (Class A) {ECO:0000313|EMBL:ERF82817.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_29536_6
unknown

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3299..3388
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

Displaying 6 items

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