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PLM3_127_b2_sep16_scaffold_12496

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_12496_1
unknown

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comp(2..469)
DNA (468bp) protein (156aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_12496_2
CSP1_5_NC10, NC10, Bacteria

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comp(521..796)
DNA (276bp) protein (92aa)
SelT/selW/selH selenoprotein; K07401 selenoprotein W-related protein bin=bin3_NC10 species=Methylobacillus flagellatus genus=Methylobacillus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
SelT/selW/selH selenoprotein
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_12496_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(816..2336)
DNA (1521bp) protein (507aa)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_12496_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2464..3015
DNA (552bp) protein (184aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_12496_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3199..3333
DNA (135bp) protein (45aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_12496_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3369..4127
DNA (759bp) protein (253aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_12496_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4180..4854
DNA (675bp) protein (225aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase bin=GWA2_Methylomirabilis_73_35 species=Beijerinckia indica genus=Beijerinckia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_12496_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4868..5929
DNA (1062bp) protein (354aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_12496_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6007..6504
DNA (498bp) protein (166aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_12496_10
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6531..7649
DNA (1119bp) protein (373aa)
Putative succinyl-diaminopimelate desuccinylase Tax=Marinobacter sp. BSs20148 RepID=M1F6B3_9ALTE
dapE; succinyl-diaminopimelate desuccinylase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3_127_b2_sep16_scaffold_12496_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7624..7953)
DNA (330bp) protein (110aa)
ABC-2 type transporter Tax=Desulfovibrio fructosivorans JJ RepID=E1JZP7_DESFR
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
ABC-2 type transporter
Displaying 11 items

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