ggKbase home page

PLM3_127_b2_sep16_scaffold_1476_7

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: 5818..6633

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LH07_THEPS similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 254.0
  • Bit_score: 166
  • Evalue 2.80e-38
fliA; RNA polymerase flagellar operon sigma factor FliA similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 254.0
  • Bit_score: 166
  • Evalue 7.90e-39
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 235.0
  • Bit_score: 166
  • Evalue 3.90e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia fergusonii → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGAGCGCAACCGGGTTCCGCTGGCCATTCGAGACCGCTGGAAGGGCCGTTCCCGCGCAGGCCGTGGAGGCGGCGTGGCGCGACTACCGGGCCACGCGCTCGGAGGGCGCGCGGGACACCTTGCTGCAGCGCTACATCCACCTGGTGCGCTACATGGCCAGCCGGCTGGCGCGGACCTTCCCGCCCTCGGTGGAGACCGAAGACCTGGTCTCGGCCGGCGTCCAGGGATTCCTGCGGGCCCTCGACGGCTACGATCCCACCATCGGCACCGACTTCAGCGTGTACGCCCTGACGCGGATCCGGGGCGCCATGGTGGACTTCGTGCGCGAGATCGACCTCATCGGTCGCGTCACCCGACGGCGCCTTCGCGACGCCGCGCGCATGCTCGGCGAACTCGAGCAGGAGCTGGGGCATCACCCCTCCCAGGCCGAGACGGCCAGGCGCCTCGGTCTCTCCGTGGACGCCTACCATCAGTTGCTGGCGCACGCGAGCGCGGCCACCGCGATGTCCCTCGAGCGCCTGGAGCACGACACCGACGAGGACGGGAACGCGATGACCCGCGCGCGCATCCCCGACACCGCGGTCAAGAGCCCGCTGACGTGCCTGGCCGACAAGGAAAGCGCGGCGGACGTGGCCACGATGGTCAGCCGGCTCTCCACCGTGCACCAGCTGGTTTTACAGTTGCACTACGTGGAGGAGCTGAACTTCCGGGAGATCGCGATGGTCATGGACATCTCGGAATCGCGCACCACTCAGCTGCACTCCGCGGCGGTGGCGGCGCTCCGGAATCGGGTCGGCGTCGCGGCCGGGATGTGA
PROTEIN sequence
Length: 272
MSATGFRWPFETAGRAVPAQAVEAAWRDYRATRSEGARDTLLQRYIHLVRYMASRLARTFPPSVETEDLVSAGVQGFLRALDGYDPTIGTDFSVYALTRIRGAMVDFVREIDLIGRVTRRRLRDAARMLGELEQELGHHPSQAETARRLGLSVDAYHQLLAHASAATAMSLERLEHDTDEDGNAMTRARIPDTAVKSPLTCLADKESAADVATMVSRLSTVHQLVLQLHYVEELNFREIAMVMDISESRTTQLHSAAVAALRNRVGVAAGM*