ggKbase home page

PLM3_127_b2_sep16_scaffold_1813_6

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: comp(7731..11738)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 1341.0
  • Bit_score: 2241
  • Evalue 0.0
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 1338.0
  • Bit_score: 1644
  • Evalue 0.0
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 1335.0
  • Bit_score: 2381
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 4008
ATGGCAGGCACGATTCAGTGCGGGCGGCGGGTCCGCAAGGACTTCGGCAAGATCCCGTCCATCGTCGAGATCCCGAATCTCATCGAGGTTCAGAAGCGCTCGTACGAAGCCTTCCTCCAGAAGGACGTCCCCGCCGACCGGCGGGAAGAGGCGGGCTTGCAGGGGGTCTTCAAGTCGGTCTTCCCGATCGACGACTACAACGGCAACGCCCGCCTCGAGTTCGACTCGTACCACTTCGGGGATCCGAAGTACACGGTCGAGGAATGCCACGACCGCGGCATGACGTTCGCCATCCCGCTCAAGGTCACGCTCCGCCTGGTGGTCTACGACCAGGACAAGGAGGCCAAGACCAAGACCATCCGCGAGCAGCGCGGCCAGGAGGTGTACCTGGGCGAGCTGCCCCTCATGACCGACAAGGGCACGTTCATCATCAACGGCACCGAGCGCGTGGTGGTCAGTCAGCTCCAGCGCTCGGCCGGCGTCTTCTTCGATGACGACAAGGGCAAGACCCTGGCCTCCGGGCGTTCCCTCTTCTCGGCGCGCGTCATCCCCTACCGTGGCTCCTGGGTCGAGTTCGACTTCGACGCCAACGAACTGCTGCACGTCCGCGTGGACCGGCGCCGGAAGATGCACGCCACCGGCTTCCTCCGGGCCTTCTGGTTCCTCGAGAAGGGCATCATCCTCTCCGACGAGGAGATCCTCGCGCAGTTCTACGAGATGGAGGACGTTCTCTCCTTCGAGGAGGGGACGGTGTGGGTGACCCTGCACCCGGAGACGCACGTCGGGGCCCGGCTGGCTGACGATGTCCGTCCGCCCCGGCACCGCGAGCCCCTCGCGCAGGCGGGTCGGCCGCTGTCGGCCAAGGTTCTGGAGAAGCTCGTCGAGGCGGGCCTCGAGAAGATTCCCCTGCGCGCGGAATCGCTGGTGGGCCGCCGCACGGGCGGCCGCATCGTGGACACGGACAGCGGTGAGGTCCTGGCCGAAACCAACAGCGAGATCACCTCGGCGGTCCTCCAGCAGATCATGAGCCGGCGGGTGGCCCCCTTCAAGCTCCTCGTGCTCAGCCCCGGGAAGATGGACGCTTCCCTTCACGAGACTTTGGCGCGGGATCACGTCAAGAACCCGGACGAGGCGCTCGTGGAGATCTACAAGAAGCTGCGCCCGGGAGATCCCCCCACGGTGGAGTCGGCCCGGGCCCTCTTCCGGGGGATGTTCGTCGACCCGCGCCGGTACGACCTGGCCCGGGTCGGACGTTTCATGATCAACAAGAAGCTCGGCATCGACGCTCCCGCGCACCTCAGAACCCTGCGCGGCGAGGACATCGTGGCCATCATCCGGCACCTCATGATGGTCAGGTTGGGCAGCAAAGCGGTCGACGACATCGACCATCTGGGCAATCGTCGGGTCCGTTCGGTCGGCGAGCTGCTGGAGAACCAGTTTCGGGTGGGTCTCACCCGTATGGAGCGGGCGGTCAAGGAGCGGATGTCGATCTCCGACATCCAGAACCTCATGCCGCACGACCTCATCAACGCCAAGCCGGTGTCGGCCGTGGTCAAGGAGTTCTTCGGGTCCTCGCAGCTCTCCCAGTTCATGGATCAGACGAACCCGCTGGCCGAGCTGACGCACAAGCGGCGCCTCTCCGCCCTGGGCCCGCGCGGACTGAGTCGCGAGCGCGCCGGCTTCGAGGTGCGGGACGTGCATCCCACCCACTACGGGCGCATCTGCCCCATCGAGACGCCGGAGGGTCCCAACATCGGCCTCATCTCGTCGCTCTCGACCTACGCGCGGACCAACGAGTTCGGCTTCATCGAGACACCGTATCGGAAGGTCGTGGGCGGGCAGGTCACCGACGAGATCGTGTTCCTGACGGCCCTGGAGGAGGAGCAGTACACGATTGCCCAGGCCAACGCGGCCGTGGATCGGAACGGCCGTTTCGTGCAGGATCGCATCTCGGCCCGCCGGAGCGGTGAGTTCCGGATGGTGCCGCCCGAGGACGTCCACTTCATGGACGTGTCTCCCAAGCAGCTCGTCTCCGTGGCGGCCTCCCTCATCTCGTTTCTGGAGAACGACGACGCGAACCGCGCCCTCATGGGCTCCAACATGCAGCGGCAGGCCGTCCCCCTCCTGCAGCCGGAAGCTCCCCTGGTCGGAACGGGCATGGAGCACATCGTGGCGAGGGACTCGGGGGCGGTGATGGTGGCCAAGCGGCCCGGCGTGATCGAGTACGTCTCCGCCGATCGCATCGTGGTGCGGGCGGAGAGCCGCTCCAAGAAAACGGATCCCGTCCAGGATCTCCCCCTCGACATCTACAATCTGACCAAGTACCGGCGGTCGAACCAGAACACCTGCATCAACCAGAAGGCCATCGTGAAGAAGGCCCAGCGGGTCCAGGCCGGCGACGTGATCGCCGACGGTCCGGCCACCGACCAGGGCGAACTCGCCCTCGGGCGGAACGTGCTGGTGGCCTTCATGCCGTGGGGCGGCTACAACTTCGAGGACGCCATCCTCGTCTCCGAGCGCCTCATCAAGGAGGACCGCTTCACCTCCATCCACATCGAGGAGTTCGAGATCCAGGCGCGGGACACCAAGCTGGGCAAGGAAGAGATCACCCGCGACATCCCCAACGTGTCGGAGGAGGCGCTCAAGGACCTCGACGACTCCGGTATCGTCCGCATCGGAGCCAAGCTCAAGCCCAGCGACATCATGGTGGGCAAGATCACGCCCAAGGGCGAGACGCAGCTCACCCCCGAGGAAAAGCTGCTGCGCGCCATCTTCGGGGAGAAGGCGGGGGACGTGCGCGATACCTCGCTGACGGTGCCGCCGGGCATCGAGGGCACGGTGGTCGACGTCAAGGTCTTCTCCCGTCGCGGCGTGGACAAGGACGAGCGGGCCAAGTCCATCGAGGAAGAGGAGATCGGGCGGCTCGAGAAGGACTACCAGGACGAGATCGCCATGGTCGAGATGGAGCGCGACCAGAAGCTCAAGAACCTCCTGGTCGGCAAGACGGTCATCCTGGAGCTGTTCGATCCCACCAGCAAGCAGAATCGCCTGGCCAAGAAGGGCGACCGCATCGAGCGCGCCCATCTCGAGAACTTTGGCTGGAACGACCTCAAGAAGATCAGGATCAAGGAAGACGAGGGGCTCGCCCAGACGGTCCGCCGCATCGAGGAACTGGCCGAGGAGCAGATCGCCCTCTTCGACAGCATGCTCGAGGAGCGCATCGGCCGTCTCCGGCGGGGAGATGACCTGCCCCCCGGCGTCATCAAGATGGTGAAGGTCTACGTGGCGGTGAAGCGCAAGCTCTCCGTGGGCGACAAGATGGCCGGCCGCCATGGGAACAAGGGCGTGGTGGCCAAGGTGCTCCCCGAGGAGGACATGCCGTTCCTGGCCGACGGCACGCCGGTCGAGATCGTGCTCAACCCCCTGGGCGTCCCGTCACGCATGAATGTGGGACAGATTCTCGAGACGCACCTCGGCTGGGCGGCCCGGGCCCTCGGCCTGTGGGTGGCCAGCCCCGTCTTCGACGGAGCCACGGAGGCGGAGATCAAGGAGCACCTGGACGAGGCCGGCCTGCCTCGTTCGGGCAAGGCGGTCCTCTATGACGGCCGCAGCGGCAAGCGTTTTCACCAAGAGGTGACCGTCGGCCAGATCTACATGCTCAAGCTGGCGCACCTTGTCGACGACAAGATGCACGCGCGTTCCATCGGTCCCTACTCGCTCGTCACCCAGCAGCCGCTGGGGGGCAAGGCGCAGTTCGGGGGCCAGCGCTTCGGCGAGATGGAGGTGTGGGCGCTGGAAGCGTACGGAGCGTCCCACACCCTCCAGGAGATGCTCACCGTCAAATCCGACGACGTGGAGGGCCGGAACCGGATCTACGAGGCCATCGTCAAGGGCGAGAACTTCCTGGAGCCGGGCACCCCGGAGTCGTTCAACGTGCTCGTCAAGGAGCTGCAGAGCTTGGCCCTGGACGTGGAACTGGTCATGAAAAATGGCAAGAAGGCCTCCTGA
PROTEIN sequence
Length: 1336
MAGTIQCGRRVRKDFGKIPSIVEIPNLIEVQKRSYEAFLQKDVPADRREEAGLQGVFKSVFPIDDYNGNARLEFDSYHFGDPKYTVEECHDRGMTFAIPLKVTLRLVVYDQDKEAKTKTIREQRGQEVYLGELPLMTDKGTFIINGTERVVVSQLQRSAGVFFDDDKGKTLASGRSLFSARVIPYRGSWVEFDFDANELLHVRVDRRRKMHATGFLRAFWFLEKGIILSDEEILAQFYEMEDVLSFEEGTVWVTLHPETHVGARLADDVRPPRHREPLAQAGRPLSAKVLEKLVEAGLEKIPLRAESLVGRRTGGRIVDTDSGEVLAETNSEITSAVLQQIMSRRVAPFKLLVLSPGKMDASLHETLARDHVKNPDEALVEIYKKLRPGDPPTVESARALFRGMFVDPRRYDLARVGRFMINKKLGIDAPAHLRTLRGEDIVAIIRHLMMVRLGSKAVDDIDHLGNRRVRSVGELLENQFRVGLTRMERAVKERMSISDIQNLMPHDLINAKPVSAVVKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPRGLSRERAGFEVRDVHPTHYGRICPIETPEGPNIGLISSLSTYARTNEFGFIETPYRKVVGGQVTDEIVFLTALEEEQYTIAQANAAVDRNGRFVQDRISARRSGEFRMVPPEDVHFMDVSPKQLVSVAASLISFLENDDANRALMGSNMQRQAVPLLQPEAPLVGTGMEHIVARDSGAVMVAKRPGVIEYVSADRIVVRAESRSKKTDPVQDLPLDIYNLTKYRRSNQNTCINQKAIVKKAQRVQAGDVIADGPATDQGELALGRNVLVAFMPWGGYNFEDAILVSERLIKEDRFTSIHIEEFEIQARDTKLGKEEITRDIPNVSEEALKDLDDSGIVRIGAKLKPSDIMVGKITPKGETQLTPEEKLLRAIFGEKAGDVRDTSLTVPPGIEGTVVDVKVFSRRGVDKDERAKSIEEEEIGRLEKDYQDEIAMVEMERDQKLKNLLVGKTVILELFDPTSKQNRLAKKGDRIERAHLENFGWNDLKKIRIKEDEGLAQTVRRIEELAEEQIALFDSMLEERIGRLRRGDDLPPGVIKMVKVYVAVKRKLSVGDKMAGRHGNKGVVAKVLPEEDMPFLADGTPVEIVLNPLGVPSRMNVGQILETHLGWAARALGLWVASPVFDGATEAEIKEHLDEAGLPRSGKAVLYDGRSGKRFHQEVTVGQIYMLKLAHLVDDKMHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASHTLQEMLTVKSDDVEGRNRIYEAIVKGENFLEPGTPESFNVLVKELQSLALDVELVMKNGKKAS*