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PLM3_127_b2_sep16_scaffold_7029_4

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: 2805..3155

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein Tax=Collinsella stercoris DSM 13279 RepID=B6GD52_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 84.0
  • Bit_score: 58
  • Evalue 2.70e-06
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA89794.1}; species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 84.0
  • Bit_score: 58
  • Evalue 3.70e-06
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 99.0
  • Bit_score: 55
  • Evalue 1.10e-05

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Taxonomy

Collinsella stercoris → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGGCCCAATCGAATGGCTGGCACCAGGAGACCACCACGAATGGCCTACCCACGAATTTGAGCGAATGCCTTCGTTCCGCGCGGCGAGATCTCGGCTGGACTCAGCAGCAGGTTGCCCACAAAGTGGGGATCACCGTGCGGAGCGTGTCCGGATGGGAGCGCGGCAAGGCCATCCCGCATCTCGAGACGCTGGCGGCGCTGGCCCGGACCCTCGGCCAGGAGCCGCAGCGCTTCATCGCGAGCGCGCAGTCGATGGCGGCCCAGCGGCGAGCCGAGCGGGTGGGGCCGGCGGCGATCAGAATCCGGGGCGCGCTGAGCGAGGTGGTCCAGCAACTCCGGATCGGGAGCTGA
PROTEIN sequence
Length: 117
MAQSNGWHQETTTNGLPTNLSECLRSARRDLGWTQQQVAHKVGITVRSVSGWERGKAIPHLETLAALARTLGQEPQRFIASAQSMAAQRRAERVGPAAIRIRGALSEVVQQLRIGS*