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PLM3_127_b2_sep16_scaffold_7029

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7029_1
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

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2..445
DNA (444bp) protein (148aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI000371AD5D
polysaccharide deacetylase
Tax=CG_Delta_02
PLM3_127_b2_sep16_scaffold_7029_2
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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448..1686
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Emiliania huxleyi CCMP1516 RepID=R1FV40_EMIHU
rpoE; RNA polymerase sigma factor
Tax=RBG_13_Deltaproteobacteria_49_15_curated
PLM3_127_b2_sep16_scaffold_7029_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1691..2479
DNA (789bp) protein (263aa)
Alr3863 protein Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YQG8_NOSS1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_7029_4
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2805..3155
DNA (351bp) protein (117aa)
DNA-binding helix-turn-helix protein Tax=Collinsella stercoris DSM 13279 RepID=B6GD52_9ACTN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA89794.1}; species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
transcriptional regulator
PLM3_127_b2_sep16_scaffold_7029_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3165..3683
DNA (519bp) protein (173aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_7029_trna_1
unknown

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3725..3815
DNA (91bp)
transferRNA Ser
PLM3_127_b2_sep16_scaffold_7029_trna_2
unknown

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3821..3900
DNA (80bp)
transferRNA Arg
PLM3_127_b2_sep16_scaffold_7029_6
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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4069..5031
DNA (963bp) protein (321aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468D1_METBF
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM3_127_b2_sep16_scaffold_7029_7
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5047..7122
DNA (2076bp) protein (692aa)
WD40-repeat containing protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TMX4_METAC
hypothetical protein
WD40-repeat containing protein {ECO:0000313|EMBL:AAM05908.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
PLM3_127_b2_sep16_scaffold_7029_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7065..8159
DNA (1095bp) protein (365aa)
hypothetical protein Tax=Burkholderia sp. JPY251 RepID=UPI000378F1E9
WD-40 repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38387.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_127_b2_sep16_scaffold_7029_9
unknown

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8186..8929
DNA (744bp) protein (248aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7029_10
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9002..9859)
DNA (858bp) protein (286aa)
Extracellular solute-binding protein family 3 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RU07_ACCPU
Glutamate/aspartate periplasmic-binding protein {ECO:0000313|EMBL:KFB68251.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
family 3 extracellular solute-binding protein
PLM3_127_b2_sep16_scaffold_7029_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10015..11409)
DNA (1395bp) protein (465aa)
soluble pyridine nucleotide transhydrogenase (EC:1.6.1.1)
Pyridine nucleotide-disulphide oxidoreductase dimerisation region Tax=Frankia sp. (strain CcI3) RepID=Q2J659_FRASC
Uncharacterized protein {ECO:0000313|EMBL:ETX06284.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_7029_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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11660..12235
DNA (576bp) protein (192aa)
Alcohol dehydrogenase GroES domain protein bin=GWF2_Methylomirabilis_70_14 species=Rhizobium sp. PDO1-076 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Zn-dependent alcohol dehydrogenase GroES-like protein
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 14 items

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