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PLM3_127_b2_sep16_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_87_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(138..743)
DNA (606bp) protein (202aa)
hypothetical protein bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
PLM3_127_b2_sep16_scaffold_87_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

785..1987
DNA (1203bp) protein (401aa)
2-hydroxyglutarate dehydrogenase (EC:1.1.99.2)
2-hydroxyglutarate dehydrogenase {ECO:0000313|EMBL:ACZ39291.1}; EC=1.1.99.2 {ECO:0000313|EMBL:ACZ39291.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
2-hydroxyglutarate dehydrogenase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4X4_SPHTD
PLM3_127_b2_sep16_scaffold_87_3
RLO_PLX_64_10, Bacteria

Not on your lists

2060..3796
DNA (1737bp) protein (579aa)
appA; oligopeptide-binding protein [Precursor] bin=RBG_19FT_COMBO_GAL15_69_19 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
oligopeptide ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_87_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3886..4647
DNA (762bp) protein (254aa)
UPI0002776946 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
fabG; 3-oxoacyl-ACP reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_87_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(4725..6440)
DNA (1716bp) protein (572aa)
peptide ABC transporter peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein bin=bin9_gal15 species=Roseomonas sp. B5 genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
ABC-type transporter, periplasmic subunit
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_87_6
Bacillus sp. 17376, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6454..7572)
DNA (1119bp) protein (373aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase Tax=Bacillus sp. 17376 RepID=V6T3M2_9BACI
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:ESU33466.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 17376.;"
nbaD; 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
PLM3_127_b2_sep16_scaffold_87_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7665..7850)
DNA (186bp) protein (62aa)
Putative uncharacterized protein (Fragment) Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWV2_9FIRM
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_87_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

7940..9388
DNA (1449bp) protein (483aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ECZ4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82556.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
phosphoglycolate phosphatase
PLM3_127_b2_sep16_scaffold_87_9
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9385..9924)
DNA (540bp) protein (180aa)
DTDP-6-deoxy-D-glucose-3,5-epimerase Tax=uncultured bacterium RepID=K2CVS4_9BACT
dTDP-4-dehydrorhamnose 3,5-epimerase
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
PLM3_127_b2_sep16_scaffold_87_10
unknown

Not on your lists

comp(10102..10398)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_87_11
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

10402..11115
DNA (714bp) protein (238aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZ90_ROSS1
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3_127_b2_sep16_scaffold_87_12
unknown

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11105..11518
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_87_13
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11543..12757)
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1Y8_CALAS
hypothetical protein
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_87_14
RLO_PLX_64_10, Bacteria

Not on your lists

12849..13514
DNA (666bp) protein (222aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000380C91D
phospholipase/Carboxylesterase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_87_15
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(13529..14158)
DNA (630bp) protein (210aa)
Two component transcriptional regulator, LuxR family Tax=Nitrolancetus hollandicus Lb RepID=I4EM62_9CHLR
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCF85775.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
two component transcriptional regulator, LuxR family
PLM3_127_b2_sep16_scaffold_87_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14177..14851)
DNA (675bp) protein (225aa)
Peptidase S1 and S6 chymotrypsin/Hap Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9X3_SPHTD
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ACZ40616.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_87_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14851..15846)
DNA (996bp) protein (332aa)
PDZ/DHR/GLGF domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9X4_SPHTD
PDZ/DHR/GLGF domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:ACZ40617.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_87_18

Not on your lists

comp(16065..16862)
DNA (798bp) protein (266aa)
Methionyl aminopeptidase Tax=uncultured prokaryote RepID=H5S8S7_9ZZZZ
Methionyl aminopeptidase {ECO:0000313|EMBL:BAL52563.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
methionine aminopeptidase
PLM3_127_b2_sep16_scaffold_87_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16955..17560
DNA (606bp) protein (202aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Dephospho-CoA kinase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1P6_SPHTD
PLM3_127_b2_sep16_scaffold_87_20
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17589..18764
DNA (1176bp) protein (392aa)
Penicillin V acylase-like amidase Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J7B6_MARPK
penicillin V acylase-like amidase
Tax=RBG_13_Deltaproteobacteria_60_28_curated
PLM3_127_b2_sep16_scaffold_87_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18797..19864
DNA (1068bp) protein (356aa)
Oxidoreductase, Gfo/Idh/MocA family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WZ1_STIAD
Predicted dehydrogenase {ECO:0000313|EMBL:CDM66525.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Gfo/Idh/MocA family oxidoreductase
PLM3_127_b2_sep16_scaffold_87_22

Not on your lists

comp(20083..21258)
DNA (1176bp) protein (392aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EIZ7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKL82782.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_87_23
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(21288..23210)
DNA (1923bp) protein (641aa)
UvrABC system protein C Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFY0_9CHLR
UvrABC system protein C
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_127_b2_sep16_scaffold_87_24

Not on your lists

comp(23344..23745)
DNA (402bp) protein (134aa)
Marine sediment metagenome DNA, contig: S01H1_L02295 {ECO:0000313|EMBL:GAF73286.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Probable ribonuclease VapC bin=GWC2_Deltaproteobacteria_42_51 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
PilT protein-like protein
PLM3_127_b2_sep16_scaffold_87_25
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24153..25142
DNA (990bp) protein (330aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IQ65_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB63860.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_87_26
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25181..26128)
DNA (948bp) protein (316aa)
Putative UDP-glucose 4-epimerase Tax=Actinoplanes sp. N902-109 RepID=R4LEV6_9ACTO
putative UDP-glucose 4-epimerase
Putative UDP-glucose 4-epimerase {ECO:0000313|EMBL:AGL13810.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3_127_b2_sep16_scaffold_87_27
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26141..26914)
DNA (774bp) protein (258aa)
mug; L-fuculose-phosphate aldolase (EC:4.1.2.17)
Putative Class II aldolase/adducin-like protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b2_sep16_scaffold_87_28
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26975..27805)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI0003738204
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJY76483.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
PLM3_127_b2_sep16_scaffold_87_29
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27847..29319
DNA (1473bp) protein (491aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3N8_9FIRM
PLM3_127_b2_sep16_scaffold_87_30
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

29355..30650
DNA (1296bp) protein (432aa)
deb:DehaBAV1_1016 homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
metM; homoserine dehydrogenase (EC:1.1.1.3)
Tax=RBG_13_Chloroflexi_54_9_curated
Displaying items 1-30 of 112 in total

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