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PLM3_127_b2_sep16_scaffold_305

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_305_1
unknown

Not on your lists

1..399
DNA (399bp) protein (133aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_305_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

672..1742
DNA (1071bp) protein (357aa)
MarR family transcriptional regulator Tax=Cupriavidus sp. BIS7 RepID=UPI0002E82B62
MarR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_305_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1769..2818
DNA (1050bp) protein (350aa)
BNR repeat-containing protein Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I8W9_9EURY
BNR repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_305_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2877..3995)
DNA (1119bp) protein (373aa)
UPI000277688A related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_127_b2_sep16_scaffold_305_5
Pseudoalteromonas ruthenica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4074..4973)
DNA (900bp) protein (300aa)
hypothetical protein Tax=Halomonas smyrnensis RepID=UPI00030EDFE0
Uncharacterized protein {ECO:0000313|EMBL:KJZ00246.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas ruthenica.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_305_6

Not on your lists

comp(5027..5725)
DNA (699bp) protein (233aa)
Putative uncharacterized protein Tax=uncultured archaeon MedDCM-OCT-S05-C418 RepID=D6PBL2_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ADD93113.1}; species="Archaea; environmental samples.;" source="uncultured archaeon MedDCM-OCT-S05-C418.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_305_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5710..6957)
DNA (1248bp) protein (416aa)
3-oxoacyl-(acyl carrier protein) synthase (EC:2.3.1.41)
3-oxoacyl-(Acyl carrier protein) synthase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FME9_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EAU65208.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3_127_b2_sep16_scaffold_305_8

Not on your lists

comp(6971..7564)
DNA (594bp) protein (198aa)
Diguanylate cyclase/phosphodiesterase Tax=uncultured archaeon MedDCM-OCT-S02-C115 RepID=D6PAZ9_9ARCH
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ADD92900.1}; species="Archaea; environmental samples.;" source="uncultured archaeon MedDCM-OCT-S02-C115.;"
diguanylate cyclase/phosphodiesterase
PLM3_127_b2_sep16_scaffold_305_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7855..8316)
DNA (462bp) protein (154aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_305_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8408..9547
DNA (1140bp) protein (380aa)
Reactivating factor for ethanolamine ammonia lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b2_sep16_scaffold_305_11
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(9571..9945)
DNA (375bp) protein (125aa)
Tax=RBG_16_Chloroflexi_51_9_curated
PLM3_127_b2_sep16_scaffold_305_12
unknown

Not on your lists

comp(9954..10268)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_305_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10340..11266)
DNA (927bp) protein (309aa)
4,5-dihydroxyphthalate decarboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b2_sep16_scaffold_305_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11288..12901)
DNA (1614bp) protein (538aa)
Vdcc protein bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
vdcc protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_305_15
unknown

Not on your lists

13085..13501
DNA (417bp) protein (139aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_305_16
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13619..13807)
DNA (189bp) protein (63aa)
Addiction module toxin, RelE/StbE Tax=Arthrobacter RepID=A1R2P7_ARTAT
addiction module toxin RelE/StbE
Addiction module toxin, RelE/StbE {ECO:0000313|EMBL:AFR27605.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
PLM3_127_b2_sep16_scaffold_305_17
unknown

Not on your lists

comp(13814..14080)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_305_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14201..15430
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Bacillus sp. L1(2012) RepID=UPI00034DD14E
rieske 2Fe-2S iron-sulfur domain protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_305_19
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15471..16901
DNA (1431bp) protein (477aa)
UbiD family decarboxylases bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM3_127_b2_sep16_scaffold_305_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16898..17935)
DNA (1038bp) protein (346aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5M7_SPHTD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_305_21
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17981..19159)
DNA (1179bp) protein (393aa)
Phenoxybenzoate dioxygenase subunit alpha {ECO:0000313|EMBL:AKH42899.1}; EC=1.14.12.- {ECO:0000313|EMBL:AKH42899.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Tax=uncultured nuHF2 cluster bacterium HF0130_29D04 RepID=E7C3C0_9BACT
Rieske (2Fe-2S) domain-containing protein
PLM3_127_b2_sep16_scaffold_305_22
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19255..20262)
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Mycobacterium smegmatis JS623 RepID=L0IVB5_MYCSM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_305_23
RLO_PLX_64_10, Bacteria

Not on your lists

20410..22128
DNA (1719bp) protein (573aa)
peptide ABC transporter peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein bin=bin9_gal15 species=Roseomonas sp. B5 genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
oligopeptide ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_305_24
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22257..23000)
DNA (744bp) protein (248aa)
Methylase Tax=Thauera sp. 27 RepID=N6XY48_9RHOO
Methylase {ECO:0000313|EMBL:ENO74803.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
trans-aconitate methyltransferase
PLM3_127_b2_sep16_scaffold_305_25
RLO_PLX_64_10, Bacteria

Not on your lists

23459..25210
DNA (1752bp) protein (584aa)
4-phytase (EC:3.1.3.26)
peptide ABC transporter peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein bin=bin9_gal15 species=Roseomonas sp. B5 genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_305_26
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25227..26438
DNA (1212bp) protein (404aa)
hypothetical protein Tax=Herbaspirillum lusitanum RepID=UPI0003183DD2
hydrolase/M24 family peptidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_305_27
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26546..27415
DNA (870bp) protein (290aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RML6_MYCRN
bleomycin resistance protein
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:AEV73683.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM3_127_b2_sep16_scaffold_305_28
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27486..28250
DNA (765bp) protein (255aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003740ED4
Uncharacterized protein {ECO:0000313|EMBL:ETW95589.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ring hydroxylating dioxygenase, alpha subunit
PLM3_127_b2_sep16_scaffold_305_29
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28235..28771
DNA (537bp) protein (179aa)
Alpha subunit of dibenzofuran dioxygenase Tax=Rhodococcus sp. YK2 RepID=B6EV24_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:ETX09274.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein
PLM3_127_b2_sep16_scaffold_305_30
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28793..29377
DNA (585bp) protein (195aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036B30E6
hcaF; 3-phenylpropionate dioxygenase subunit beta
3-phenylpropionate dioxygenase, beta subunit {ECO:0000313|EMBL:CBG67434.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
Displaying items 1-30 of 41 in total

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