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PLM3_127_b2_sep16_scaffold_5334

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5334_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2..259)
DNA (258bp) protein (86aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
diaminopimelate decarboxylase (EC:4.1.1.20)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5334_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(633..929)
DNA (297bp) protein (99aa)
HEPN domain-containing protein bin=bin1_lowGC species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
HEPN domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5334_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(970..1272)
DNA (303bp) protein (101aa)
DNA polymerase subunit beta bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
DNA polymerase subunit beta
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5334_4
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1504..2094)
DNA (591bp) protein (197aa)
2-hydroxychromene-2-carboxylate isomerase family protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08QE2_STIAD
DSBA oxidoreductase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3_127_b2_sep16_scaffold_5334_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2485..2709
DNA (225bp) protein (75aa)
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
ANTAR domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5334_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2772..4391
DNA (1620bp) protein (540aa)
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5334_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4558..5490
DNA (933bp) protein (311aa)
ferrochelatase (EC:4.99.1.1) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ferrochelatase (EC:4.99.1.1)
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_5334_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

5506..7002
DNA (1497bp) protein (499aa)
protoporphyrinogen IX and coproporphyrinogen III oxidase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
protoporphyrinogen IX and coproporphyrinogen III oxidase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_5334_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7161..7934
DNA (774bp) protein (258aa)
glucose 1-dehydrogenase (EC:1.1.1.47)
short-chain dehydrogenase/reductase sdr bin=bin1_lowGC species=Rhodonellum psychrophilum genus=Rhodonellum taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5334_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8037..8375
DNA (339bp) protein (113aa)
id=14425704 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5334_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8397..9401
DNA (1005bp) protein (335aa)
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein bin=bin1_lowGC species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin1_lowGC organism_group=Unknown_CP
peptidoglycan-associated lipoprotein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5334_12
unknown

Not on your lists

9726..10529
DNA (804bp) protein (268aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5334_13
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

11105..11470
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XC10_9BACT
cupin domain-containing protein
Tax=RBG_13_Nitrospirae_43_8_curated
PLM3_127_b2_sep16_scaffold_5334_14
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

11969..12550
DNA (582bp) protein (194aa)
PEGA domain-containing protein bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
PLM3_127_b2_sep16_scaffold_5334_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13381..13713
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6QC99_9ZZZZ
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM3_127_b2_sep16_scaffold_5334_16
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

Not on your lists

13805..14143
DNA (339bp) protein (113aa)
Putative uncharacterized protein bin=GWD2_Clostridiales_32_59 species=Vibrio shilonii genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
PLM3_127_b2_sep16_scaffold_5334_17
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14632..14925)
DNA (294bp) protein (98aa)
Succinoglycan biosynthesis protein Tax=uncultured bacterium RepID=K1YD13_9BACT
Excalibur
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Displaying 17 items

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