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PLM3_127_b2_sep16_scaffold_10179

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10179_1
unknown

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3..110
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10179_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(188..421)
DNA (234bp) protein (78aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10179_3
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(507..1196)
DNA (690bp) protein (230aa)
Peptidase S45, penicillin amidase Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IUB4_NOSP7
penicillin amidase
Acyl-homoserine-lactone acylase {ECO:0000313|EMBL:EWH12401.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
PLM3_127_b2_sep16_scaffold_10179_4
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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comp(1168..1557)
DNA (390bp) protein (130aa)
Peptidase S45 penicillin amidase Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPU4_EMTOG
peptidase S45 penicillin amidase
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
PLM3_127_b2_sep16_scaffold_10179_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1592..1870
DNA (279bp) protein (93aa)
BolA family protein bin=bin1_lowGC species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
BolA family protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10179_6
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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1883..2209
DNA (327bp) protein (109aa)
monothiol glutaredoxin bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
monothiol glutaredoxin
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_10179_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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2386..3096
DNA (711bp) protein (237aa)
Monofunctional biosynthetic peptidoglycan transglycosylase Tax=Cecembia lonarensis LW9 RepID=K1KZ78_9BACT
monofunctional biosynthetic peptidoglycan transglycosylase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_10179_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(3142..4365)
DNA (1224bp) protein (408aa)
rpoD; DNA-directed RNA polymerase, sigma70/sigma32 subunit bin=bin1_lowGC species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
RNA polymerase sigma factor RpoD
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10179_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4417..5037)
DNA (621bp) protein (207aa)
TetR family transcriptional regulator bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
acnR; TetR family transcriptional regulator
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10179_10
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

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comp(5170..5316)
DNA (147bp) protein (49aa)
nupC; protein NupC
Na+ dependent nucleoside transporter domain protein, partial bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=GWA2_WOR_2_45_18_curated
PLM3_127_b2_sep16_scaffold_10179_11
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(5410..5661)
DNA (252bp) protein (84aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003692D29
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Displaying 11 items

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