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PLM3_127_b2_sep16_scaffold_10196

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10196_1

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1..135
DNA (135bp) protein (45aa)
Marine sediment metagenome DNA, contig: S01H1_L00898 {ECO:0000313|EMBL:GAF71818.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transposase (Fragment) bin=GWF2_Nitrospirae_44_13 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
PLM3_127_b2_sep16_scaffold_10196_2
unknown

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comp(187..579)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10196_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(873..1778)
DNA (906bp) protein (302aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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1890..3095
DNA (1206bp) protein (402aa)
cysteine desulfurase NifS (EC:2.8.1.7)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00035EB8D2
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_10196_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3104..3568
DNA (465bp) protein (155aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3615..4775
DNA (1161bp) protein (387aa)
RND family efflux transporter MFP subunit bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
RND family efflux transporter MFP subunit
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4779..5492
DNA (714bp) protein (238aa)
ABC-type antimicrobial peptide transport system, ATPase component bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
ABC transporter-like protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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5525..6088
DNA (564bp) protein (188aa)
hypothetical protein; K02004 putative ABC transport system permease protein bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6186..6623
DNA (438bp) protein (146aa)
hypothetical protein; K02004 putative ABC transport system permease protein bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6628..7596
DNA (969bp) protein (323aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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7927..8637
DNA (711bp) protein (237aa)
recO; DNA repair protein RecO bin=bin1_lowGC species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
recO; DNA repair protein RecO
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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8612..9790
DNA (1179bp) protein (393aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.35 2.3.1.1)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_13
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(9969..11072)
DNA (1104bp) protein (368aa)
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE91_THET1
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_10196_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(11273..11647)
DNA (375bp) protein (125aa)
id=14424886 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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11842..12528
DNA (687bp) protein (229aa)
ATP-binding protein; K06927 bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
ATP-binding protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_10196_trna_1
unknown

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comp(12588..12662)
DNA (75bp)
transferRNA His
Displaying 16 items

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