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PLM3_127_b2_sep16_scaffold_2801

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2801_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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37..1260
DNA (1224bp) protein (408aa)
bcpC; cofactor-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] bin=bin1_lowGC species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
phosphoglycerate mutase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_trna_1
unknown

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1359..1442
DNA (84bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_2801_2
unknown

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comp(1452..1727)
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2801_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1783..2169)
DNA (387bp) protein (129aa)
Gliding motility-associated protein bin=bin1_lowGC species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
gliding motility-associated protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_4
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2218..2898
DNA (681bp) protein (227aa)
D-amino-acid oxidase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7T5_MYXSD
D-amino-acid oxidase
D-amino-acid oxidase {ECO:0000313|EMBL:AGC44931.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3_127_b2_sep16_scaffold_2801_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2979..3284
DNA (306bp) protein (102aa)
D-amino acid oxidase (EC:1.4.3.3)
D-amino acid oxidase {ECO:0000313|EMBL:ABG03500.1}; EC=1.4.3.3 {ECO:0000313|EMBL:ABG03500.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
D-amino acid oxidase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYM8_RUBXD
PLM3_127_b2_sep16_scaffold_2801_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(3331..5028)
DNA (1698bp) protein (566aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
AMP-dependent synthetase and ligase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(5060..5785)
DNA (726bp) protein (242aa)
Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes bin=bin1_lowGC species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin1_lowGC organism_group=Unknown_CP
Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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5922..7016
DNA (1095bp) protein (365aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Tax=Clostridium sp. 7_2_43FAA RepID=V9HCH8_9CLOT
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2801_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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7203..7790
DNA (588bp) protein (196aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
guanylate kinase (EC:2.7.4.8)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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7800..9962
DNA (2163bp) protein (721aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] bin=bin1_lowGC species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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10066..10995
DNA (930bp) protein (310aa)
signal peptidase I (EC:3.4.21.89) bin=bin1_lowGC species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
signal peptidase I (EC:3.4.21.89)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_12
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

11014..11358
DNA (345bp) protein (115aa)
id=14425795 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2801_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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11367..11900
DNA (534bp) protein (178aa)
PyrR bifunctional protein (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] bin=bin1_lowGC species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin1_lowGC organism_group=Unknown_CP
uracil phosphoribosyltransferase (EC:2.4.2.9)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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11903..12832
DNA (930bp) protein (310aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
aspartate carbamoyltransferase (EC:2.1.3.2)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2801_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

12829..14112
DNA (1284bp) protein (428aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
dihydroorotase
Tax=CSP1_2_Dadabacteria
Displaying 16 items

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