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PLM3_127_b2_sep16_scaffold_3386

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3386_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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37..486
DNA (450bp) protein (150aa)
smpB; SsrA-binding protein; K03664 SsrA-binding protein bin=bin1_lowGC species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
SsrA-binding protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_2
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1034..1750
DNA (717bp) protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azotofixans).;"
ribonuclease PH Tax=Paenibacillus sp. HW567 RepID=UPI00036F7BFC
ribonuclease PH
PLM3_127_b2_sep16_scaffold_3386_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1775..2362
DNA (588bp) protein (196aa)
deoxyribonucleotide triphosphate pyrophosphatase bin=bin1_lowGC species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
deoxyribonucleotide triphosphate pyrophosphatase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2483..4096
DNA (1614bp) protein (538aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] bin=bin1_lowGC species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
CTP synthase (EC:6.3.4.2)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4177..6189
DNA (2013bp) protein (671aa)
ribonuclease II; K01147 exoribonuclease II [EC:3.1.13.1] bin=bin1_lowGC species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
ribonuclease II
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(6273..6986)
DNA (714bp) protein (238aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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7248..9479
DNA (2232bp) protein (744aa)
PTSINtr with GAF domain, PtsP Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMP8_DESAA
protein PtsP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_3386_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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9611..10489
DNA (879bp) protein (293aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

10693..11340
DNA (648bp) protein (216aa)
gltA; citrate synthase (EC:2.3.3.1) bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
citrate synthase I
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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11420..11878
DNA (459bp) protein (153aa)
citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] bin=bin1_lowGC species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin1_lowGC organism_group=Unknown_CP
gltA; citrate synthase (EC:2.3.3.1)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(11880..13304)
DNA (1425bp) protein (475aa)
proton-translocating NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
proton-translocating NADH-quinone oxidoreductase, chain N
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(13325..14857)
DNA (1533bp) protein (511aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14850..16769)
DNA (1920bp) protein (640aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
NADH dehydrogenase subunit L (EC:1.6.5.3)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(16774..17073)
DNA (300bp) protein (100aa)
nuoK; NADH-quinone oxidoreductase chain K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] bin=bin1_lowGC species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
NADH-ubiquinone oxidoreductase chain K (EC:1.6.5.3)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17076..17591)
DNA (516bp) protein (172aa)
proton-translocating NADH-quinone oxidoreductase subunit J; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
nuoJ; putative NADH dehydrogenase chain J (EC:1.6.5.-)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(17790..18299)
DNA (510bp) protein (170aa)
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH dehydrogenase subunit I bin=bin1_lowGC species=Thiovulum sp. ES genus=Thiovulum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(18312..19274)
DNA (963bp) protein (321aa)
NADH dehydrogenase subunit H (EC:1.6.5.3); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
NADH dehydrogenase subunit H (EC:1.6.5.3)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(19271..20428)
DNA (1158bp) protein (386aa)
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.99.5 1.6.5.3) bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
NAD(P)H-quinone oxidoreductase subunit H (EC:1.6.99.5)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_19
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(20401..21435)
DNA (1035bp) protein (345aa)
NADH-quinone oxidoreductase subunit B bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
NADH-quinone oxidoreductase subunit B
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3386_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(21417..21785)
DNA (369bp) protein (123aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
NADH-quinone oxidoreductase
Tax=CSP1_2_Dadabacteria
Displaying 20 items

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