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PLM3_127_b2_sep16_scaffold_4959

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4959_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2..667
DNA (666bp) protein (222aa)
ATP-binding protein; K06927 bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
ATP-binding protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4959_trna_3
unknown

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comp(720..794)
DNA (75bp)
transferRNA His
PLM3_127_b2_sep16_scaffold_4959_trna_2
unknown

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comp(808..881)
DNA (74bp)
transferRNA Arg
PLM3_127_b2_sep16_scaffold_4959_2
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1172..3094)
DNA (1923bp) protein (641aa)
agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase {ECO:0000313|EMBL:CCJ35150.1}; EC=3.5.3.12 {ECO:0000313|EMBL:CCJ35150.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;"
Agmatine deiminase Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KXG8_METBM
PLM3_127_b2_sep16_scaffold_4959_trna_1
unknown

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comp(3634..3706)
DNA (73bp)
transferRNA Pro
PLM3_127_b2_sep16_scaffold_4959_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3920..4564
DNA (645bp) protein (215aa)
id=14425421 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4959_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4810..6174)
DNA (1365bp) protein (455aa)
cytochrome-c peroxidase (EC:1.11.1.5)
Di-haem cytochrome c peroxidase Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UQL6_9AQUI
Methylamine utilization protein mauG {ECO:0000313|EMBL:EYF03235.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
PLM3_127_b2_sep16_scaffold_4959_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(6266..6544)
DNA (279bp) protein (93aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003789205
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4959_6
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6544..7233)
DNA (690bp) protein (230aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
Peptide methionine sulfoxide reductase MsrA Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4E4_DESTA
methionine-S-sulfoxide reductase
PLM3_127_b2_sep16_scaffold_4959_7
unknown

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comp(7335..7466)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4959_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7521..8483)
DNA (963bp) protein (321aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM3_127_b2_sep16_scaffold_4959_9
unknown

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comp(8516..9169)
DNA (654bp) protein (218aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4959_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9367..9807)
DNA (441bp) protein (147aa)
id=14426113 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4959_11
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(10017..10430)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F8V8_9DELT
Hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4959_12
bacterium UASB270, Bacteria

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comp(10528..11526)
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK61016.1}; species="Bacteria.;" source="bacterium UASB270.;"
aldo/keto reductase bin=RBG_16_Aminicenantes_63_16_plus species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
aldo/keto reductase
PLM3_127_b2_sep16_scaffold_4959_13
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(11548..12255)
DNA (708bp) protein (236aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase bin=GWB2_Nitrospirae_rel_47_37 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4959_14
unknown

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comp(12233..12394)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4959_15
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(12395..12673)
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PZE6_KRIFD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4959_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12830..13549
DNA (720bp) protein (240aa)
Dienelactone hydrolase family protein Tax=Beggiatoa sp. PS RepID=A7BX48_9GAMM
dienelactone hydrolase family protein
Dienelactone hydrolase family protein {ECO:0000313|EMBL:BAP55700.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PLM3_127_b2_sep16_scaffold_4959_17
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

13868..14383
DNA (516bp) protein (172aa)
Dense granule protein GRA11 Tax=Toxoplasma gondii ME49 RepID=S8GRW6_TOXGO
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4959_18
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14580..15326)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036EB463
glutamine amidotransferase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM3_127_b2_sep16_scaffold_4959_19
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15463..16836)
DNA (1374bp) protein (458aa)
Flavohemoprotein Tax=gamma proteobacterium IMCC2047 RepID=F3KBG7_9GAMM
Flavohemoprotein {ECO:0000313|EMBL:EGH00285.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
PLM3_127_b2_sep16_scaffold_4959_20
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16833..17480)
DNA (648bp) protein (216aa)
hypothetical protein Tax=Methylohalobius crimeensis RepID=UPI0003B74490
Uncharacterized protein {ECO:0000313|EMBL:EGH00286.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
PLM3_127_b2_sep16_scaffold_4959_21
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(17568..17777)
DNA (210bp) protein (70aa)
Glyoxalase/bleomycin resistance protein/dioxygenase bin=GWF2_Planctomycetes_50_10 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=GWF2_Planctomycetes_50_10_curated
PLM3_127_b2_sep16_scaffold_4959_22
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17778..17987)
DNA (210bp) protein (70aa)
glyoxalase Tax=Burkholderia oklahomensis RepID=UPI00016A8A0F
glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:AIO66508.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
Displaying 25 items

View Taxonomy